Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4010 ATGGAGAGATTCTCATTCTCCTTTCTATTTTTCATCATTTATCTACTTTTTCTCTTCACTCCTCAATTAGCTAGATCACAAAACGACGATTCACAACCACTTTTAGCACTCAAATCCTCCATTGATATTCACAACAAGCTTCCATGGCTACAACAAGTAAACGACGACGTTTGCACTTGGGTAGGTGTTAAAGACTGTTACCAAGGTAGAGTTAGAAAGCTAGTACTTGAGTATTTCAACTTAACGGGGAAATTAGATTCACAAATTTTAAACCGTTTGGATCAACTTCGAGTTCTTAGTTTCAAAGGAAACTCACTCTCTGGTCAAATCCCTAATCTCTCGAATCTCGTTAATCTTAAGTCTATTTATCTTAACGATAACGATTTCTCCGGCGAGTTTCCTGTTTCGGTTTCGCTTCTTCATAGAGTCAAAGTTATTGTTTTATCCGGTAATAAAATCTCCGGCGAGATTCCGGTGTCGTTGCTTAAGCTTTCTCGGCTCTATGTACTGTACTTGCAAGACAATTTGTTTACTGGTTCGGTTCCGAGTTTTGATCAAACCGGACTTAAGTACTTGAATGTCTCGAACAATAGACTCTCCGGCAAGATTCCGGTGACAACTACATTGATCCGGTTCAATGCGTCGTCGTTTTCAGGAAACATAGAGCTCTGCGGTGAACAGATCCACCGTGAATGCAAAAATAGGACTCTGTTAGCACCACCGCCGTTTGGTGTGGGTCCCGTTGGAGGAAACGCGAAAACGACGTCGTCGAGATCGAACCGTAAGAAACTGATAAAGATAATTGGAGGAAGCGTTGGTGGGTTTGTTTTGTTGTTAATTTGTTTAATTTTACTGGTGTGGGTGATTTGCAAGAACCGTAGGAAGAGAGTGGGTTCTTCCGGAGCGAGAAGGAACAACAAGGGTAATGCTGACGTGGCAGCTACAGAAGGTGAAAATCCTGGAGAAGGAGAGGGTAGAGGAAGTAATTATGAAGCAAAACAAGGGGGGTTTGCTTGGGAAAATGAGGGTATAGGGAAACTGGTGTTCTGCGGAGCAGGGGATCGTGAAATGGGTTATAGTTTAGAGGATTTACTTAAGGCTTCAGCAGAGACATTAGGGAGGGGTATTATGGGAAGTACATATAAAGCAGTGATGGAATCAGGTTTTATTGTTACTGTTAAGAGGTTGAAAGATGCTAGGTACCCTGGGTTAGAGGAGTTTAGGGCACATATAGATTTACTTGGGAAGCTTAGACACCCTAATCTGGTCCCACTTAGGGCTTATTTTCAAGCAAAAGAAGAACGTCTTCTTGTCTATGATTATTTCCCCAATGGAAGCCTTTTCTCTCTTATTCATGGATCGAAAACATCTAATGGGGGAAAACCTCTTCACTGGACATCATGTCTTAAAATTGCAGAAGATCTAGCAACAGGCATTCTCTATATCCACCAAAACCCTGGCATGACACACGGAAACCTGAAGTCTTCTAATGTGTTACTTGGTTCTGACTTTGAGTCCTGTCTCACTGATTATGGTCTCAACGTGTTCCTCAATCCCGACACAATGGATGAACCAAGTGCCACTTCTTTTTTCTATAGAGCACCCGAGTGCCGCAGTTTTCAACGGCCACAAACTCAATCTGCCGATGTATACAGCTTTGGTGTTCTTCTCCTCGAGCTTTTGACAGGAAAAACACCCTATCAAGACCTTGTTCAGGCACACGGTTCGGATATACCTAGATGGGTTCGGTCAGTACGTGAAGAAGAGACCGAGTCCGGAGATGATCCTGCCTCATCAGGCAATGAATCTTCTGAAGAGAAGCTTCAGGCTCTTTTGAACATTGCAATGGCATGTGTTTCAGTTAGTCCAGAGAATAGACCTACAATGAGAGAAGTTCTAAAGATGATAAGAGATGCAAGAGGGGAAACTCATGTCTCATCTAATAATAGTAGTGATCATTCACCTGGTAGATGGTCAGATACTGTTCAAAGCTTGCCAAGAGATGAACATCTTAGCATATAA 2022 0.4238 MERFSFSFLFFIIYLLFLFTPQLARSQNDDSQPLLALKSSIDIHNKLPWLQQVNDDVCTWVGVKDCYQGRVRKLVLEYFNLTGKLDSQILNRLDQLRVLSFKGNSLSGQIPNLSNLVNLKSIYLNDNDFSGEFPVSVSLLHRVKVIVLSGNKISGEIPVSLLKLSRLYVLYLQDNLFTGSVPSFDQTGLKYLNVSNNRLSGKIPVTTTLIRFNASSFSGNIELCGEQIHRECKNRTLLAPPPFGVGPVGGNAKTTSSRSNRKKLIKIIGGSVGGFVLLLICLILLVWVICKNRRKRVGSSGARRNNKGNADVAATEGENPGEGEGRGSNYEAKQGGFAWENEGIGKLVFCGAGDREMGYSLEDLLKASAETLGRGIMGSTYKAVMESGFIVTVKRLKDARYPGLEEFRAHIDLLGKLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSNGGKPLHWTSCLKIAEDLATGILYIHQNPGMTHGNLKSSNVLLGSDFESCLTDYGLNVFLNPDTMDEPSATSFFYRAPECRSFQRPQTQSADVYSFGVLLLELLTGKTPYQDLVQAHGSDIPRWVRSVREEETESGDDPASSGNESSEEKLQALLNIAMACVSVSPENRPTMREVLKMIRDARGETHVSSNNSSDHSPGRWSDTVQSLPRDEHLSI* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4010 673 Gene3D Transferase(Phosphotransferase) domain 1 442 661 - -
Psa7g4010 673 MobiDBLite consensus disorder prediction 641 673 - -
Psa7g4010 673 MobiDBLite consensus disorder prediction 299 327 - -
Psa7g4010 673 ProSiteProfiles Protein kinase domain profile. 366 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4010 673 Gene3D Ribonuclease Inhibitor 187 235 IPR032675 -
Psa7g4010 673 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE 29 661 - -
Psa7g4010 673 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 29 661 - -
Psa7g4010 673 Gene3D Ribonuclease Inhibitor 27 186 IPR032675 -
Psa7g4010 673 SUPERFAMILY L domain-like 38 221 - -
Psa7g4010 673 MobiDBLite consensus disorder prediction 642 673 - -
Psa7g4010 673 Gene3D Phosphorylase Kinase; domain 1 352 441 - -
Psa7g4010 673 MobiDBLite consensus disorder prediction 585 605 - -
Psa7g4010 673 Pfam Protein kinase domain 369 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4010 673 SUPERFAMILY Protein kinase-like (PK-like) 370 647 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4010 Psa-Chr7 330939383 330944408 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4010 5 673 Receptor kinase-like Gene Family AT1G60630 60.503 0.0 766
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Psa7g4010 Pkinase 4.7e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4010 - - lja:Lj3g3v3500180.1 1025.39