Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3990 ATGGCATTTCGGTTGCCATTGATAAAGCAAGCTAAGAAGCATATCCTCTGCCGCAGACATTCAAAAGGCAAAGCAGTGTTGTCAGCTAATAGTAATATACCAAAAGGGCATTTAGCAGTATATGTTGGAGAAGAGAAAAAGAAGAGATTTGTGGTTCCAATATCATATTTGCATCAACCTGCTTTTCAACAATTTCTTTGTAAAGCTGAAGATGAATTTGGATTTAATCATCCGATGGGCGGTCTCACCATTCCTTGCAGAGAAGAGATCTTTGTGAAGGTAACTTCTCAATTGGAAAGTTAA 303 0.3795 MAFRLPLIKQAKKHILCRRHSKGKAVLSANSNIPKGHLAVYVGEEKKKRFVVPISYLHQPAFQQFLCKAEDEFGFNHPMGGLTIPCREEIFVKVTSQLES* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3990 100 PANTHER SMALL AUXIN-UP RNA-RELATED 27 99 - -
Psa7g3990 100 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 27 99 IPR003676 GO:0009733
Psa7g3990 100 Pfam Auxin responsive protein 18 96 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3990 Psa-Chr7 329968537 329969424 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3990 32 91 Calmodulin-binding Proteins AT5G20810 55.000 2.09e-15 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3990 K14488 - qsu:112040181 126.331