Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3961 ATGGAGATTGAAGCATCGAGTGGTGGTAGCAACAACAACAAAAGATGCAACATGGATGAAAGTGAAGAAGAAGAAGAAACATATTGTGGCATTACTAGGGGAAGTTTCTTAGCATGGGAAGATCTAAGAGTTATTATACCAAATTTTGGTAAAGGACCAACCAAAAAGATTCTTAATGGCCTTCATGGTTTTGCTGAGCCTGGTAAAATCATGGCTATTATGGGCCCTTCTGGTTCCGGAAAATCAACTTTGCTCGACACTCTCGCAGGTAGACTCTCCAAAAATGTTGTAATGACAGGAAATGTTCTTCTCAATGGGAAGAAAAAAAATCCAGGCTATGGTTTTGTTGCATACGTAACACAAGAAGATGTGTTATTGGGAACTTTGACAGTTAGAGAAACTATAACATATTCGGCGCATCTACGTCTTCCGACATCGATGGCGAAAGAAGATGTTAGCGGCATAATCGAAGGAACAATCATAGAAATGGGTCTTCAAGACTGTGCTGATAGGTTAATAGGTAACTGGCATTTGAGAGGTATAAGTGGTGGTGAAAAGAAAAGACTTAGCATTGCACTTGAAATTCTCACAAGGCCGCGATTATTGTTTCTCGATGAACCGACCAGTGGATTGGATAGTGCTTCAGCGTTCTTCGTTGTTCAAACTCTTCGAAACGTTGCTCGTGATGGAAGGACTGTTATTTCCTCTATTCATCAACCTAGCAGTGAAGTCTTTGCGCTTTTTGATGATCTTTTCTTGCTTTCTGGTGGCGAAACTGTTTATTTTGGTGAAGCAAAATTGGCAATTGAGTTTTTCGCTGAGGCTGGTTTCCCTTGTCCGCGTAAAAGAAATCCTTCTGATCATTTCTTAAGATGTATCAATTCTGATTTTGATGTCGTAAATGCCACGCTAAAGGGATCTCAAAGGATTCATGATGTCCCAAATTCAGCAGATCCTTTTATGAACTTGGCAACAGCACAGATTAAGGAAAGGTTAATCGAGAGATTTAGGCGTTCAAATTACGCGAGAAGAGTAAAAGACAAGATTCAAGAACTATCAACTCATGAAGGGCTTGAAAATGAGGCAAAATATGGAAGCCAAGCTAGTTGGTGGAAGCAACTCTCTACACTGACAAAGAGATCATTTGTGAATATGAGTAGAGATGTTGGTTACTATTGGTTGAGAATTATAATCTACATCATTGTATCTATATGTGTTGGAACTATCTATTTTGATATTGGTTATAGCTATACTTCAATCTTGGCTCGCGGTGCGTGTGGTGCATTTATATCAGGATTCATGACTTTCATGTCGATTGGAGGCTTTCCATGTTTTATTGAAGAAATGAAGGTATTTTATCGAGAAAGGCTTAATGGATATTATGGCGTAGCGGCATATATTTTATCGAACTTTCTATCATCGTTCCCATTCTTGGTTTCTATCGCTGTTACTTCTAGCACCATCACGTATAACATGGTGAAATTCAGGCCAGGATTCGTTCACTTTGCGTTTTTCGCTCTCAATATCTACGGATGCATCTCAGTGATCGAGAGTCTCATGATGGTTGTAGCTTCACTTGTTCCGAATTTCCTCATGGGAATCATTACAGGAGCAGGAATCATTGGAATCATGATGATGACCTCTGGATTCTTTAGGTTGCTATCTGATCTTCCAAAACCGGTTTGGCGCTATCCCATTTCGTATATCAGTTACGGCGCATGGGCAATACAGGTACCTAACTTCATATTGAAAGTGTGTCAGGTGTCTGGTGTCTTATGTCTGATACTGTCACGACACAGACATAAAGTTACATTCAATTACTTTTATTTTTGA 1833 0.3955 MEIEASSGGSNNNKRCNMDESEEEEETYCGITRGSFLAWEDLRVIIPNFGKGPTKKILNGLHGFAEPGKIMAIMGPSGSGKSTLLDTLAGRLSKNVVMTGNVLLNGKKKNPGYGFVAYVTQEDVLLGTLTVRETITYSAHLRLPTSMAKEDVSGIIEGTIIEMGLQDCADRLIGNWHLRGISGGEKKRLSIALEILTRPRLLFLDEPTSGLDSASAFFVVQTLRNVARDGRTVISSIHQPSSEVFALFDDLFLLSGGETVYFGEAKLAIEFFAEAGFPCPRKRNPSDHFLRCINSDFDVVNATLKGSQRIHDVPNSADPFMNLATAQIKERLIERFRRSNYARRVKDKIQELSTHEGLENEAKYGSQASWWKQLSTLTKRSFVNMSRDVGYYWLRIIIYIIVSICVGTIYFDIGYSYTSILARGACGAFISGFMTFMSIGGFPCFIEEMKVFYRERLNGYYGVAAYILSNFLSSFPFLVSIAVTSSTITYNMVKFRPGFVHFAFFALNIYGCISVIESLMMVVASLVPNFLMGIITGAGIIGIMMMTSGFFRLLSDLPKPVWRYPISYISYGAWAIQVPNFILKVCQVSGVLCLILSRHRHKVTFNYFYF* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3961 610 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 269 IPR027417 -
Psa7g3961 610 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 37 281 IPR003439 GO:0005524
Psa7g3961 610 MobiDBLite consensus disorder prediction 1 15 - -
Psa7g3961 610 ProSitePatterns ABC transporters family signature. 181 195 IPR017871 GO:0005524
Psa7g3961 610 PANTHER ABC TRANSPORTER G FAMILY MEMBER 13 33 577 - -
Psa7g3961 610 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 33 577 - -
Psa7g3961 610 Gene3D - 38 275 IPR027417 -
Psa7g3961 610 Pfam ABC transporter 65 209 IPR003439 GO:0005524
Psa7g3961 610 MobiDBLite consensus disorder prediction 1 22 - -
Psa7g3961 610 CDD ABCG_EPDR 34 263 - -
Psa7g3961 610 Pfam ABC-2 type transporter 238 294 IPR043926 GO:0140359
Psa7g3961 610 SMART AAA_5 67 238 IPR003593 -
Psa7g3961 610 Pfam ABC-2 type transporter 373 577 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3961 Psa-Chr7 328185387 328190719 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3961 41 250 Calmodulin-binding Proteins AT2G36910 30.870 2.18e-12 68.6