Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3958 ATGGAGATAGAGGTAGAGAGAGGAATGAGTTCAAAAAGAGGAATGCATTTAGTGTGGGAAAATCTGAGTGTTGTGATTCCAAATTTTGGGAATGGACACACAAAGAGGTTGCTTAATGGTTTGAGTGGATATGGTGAACCAAACAGAATCATGGCTATTATGGGTCCATCTGGTTCTGGAAAATCTACTCTTCTTGATGCTTTAGCAGGTAGATTATCTAGAAATGTTATCATGTCCGGAAATGTGCTTTTAAATGGAAAGAAAAGGAATCTAGACTATGGAGTTGTAGCTTATGTGACACAAGAAGATATAATGTTAGGAACACTAACAGTCAGAGAGACAATATCATACTCAGCAAATTTAAGGCTTCCAACAACAATGACAAAACAAGAGATAAATGACATTGTTGAAGGAACAATCATAGAAATGGGTCTTCAAGATTGTGCTGATAGGCTTATAGGAAATTGGCACTTGAGAGGTATAAGTGGTGGTGAAAAGAAAAGACTAAGCATAGCACTTGAAATCTTAACAAGACCTTGTCTCTTGTTCCTGGATGAACCTACAAGTGGTTTGGACAGTGCTTCAGCTTATTTTGTTGCTCAAACTTTGCGAAACATTGCTCATGATGGGAGAACTGTGATTTCTTCTATTCATCAACCGAGTAGCGAGGTTTTTGAATTATTTGATGATCTCTTTCTGCTTTCGGGAGGTCAGACAATTTACTTTGGACCGGCTGAAAATGCGGTTGAGTTCTTTGCGAAAGCGGGATTTCCGTGTCCGAGTAGAAGAAACCCTTCTGATCATTTTCTTCGCTGTATTAATTCAGACTTCGACACTGTCACGACTGCTATGATGGCTTCCCGGGGAACACATGAACAAAAAACATTAGCACCGTCAACGGTGAACCTATCGACAGCAAACTTATCGACAGCAGCGACCAAAGCAGTACTCGTAGAGAAATACCGTTGGTCAGAATATGCGACTTGTGCAAGAGCAAGAATCAAACAAATGTCGAACTTTGACGGACGTGATTATGAAAGTAAGAGCAAGAGCCAAGTCAAATGGTGGAAGCAACTATCAACTTTGACTCAGAGATCTTTTGTGAACATGTCTAGAGATGTAGGGTACTATTGGATAAGGTTAACAATCTATGTTGCTTTATCTTTGTGTGTTGGAACAATCTTTTTCGAAGTTGGTTCAAGTTATCAAGCCATTTACGCAAGAGGAGCATGTGGCGCTTTTATATCAGGTTTCATGACATTTATGGCCATAGGAGGATTCCCATCGTTCATAGAGGAAATGAAGGTCTTCTATAAGGAAAGGCTGAATGGATATTATGGAATTGCAGTATACATTCTGTCGAATTTTCTCTCTTCTTTTCCTTTTGTAGCAGCGATGTCCTTTGCTACTGGGACGATAACATATTATATGGTTAAGTTTCGTCCCGAGTTTTCGCATCTTTTGTATATCTGTTTGGATCTTTTGGGATGTATTGCTGTTGTGGAGAGCTCAATGATGATTATAGCTGCATTGGTTCCCAACTTTCTTATGGGATTGATAATTGGAGCAGGATATATCGGTCTTATGATGATGACTGCTGGCTATTTCCGGAAGATCCATGATCTTCCTAAATTCTTCTGGCGTTACCCGATTTCATACATCAATTATGGAGCATGGGGATTGCAGGTATATTTGTATTAA 1701 0.3945 MEIEVERGMSSKRGMHLVWENLSVVIPNFGNGHTKRLLNGLSGYGEPNRIMAIMGPSGSGKSTLLDALAGRLSRNVIMSGNVLLNGKKRNLDYGVVAYVTQEDIMLGTLTVRETISYSANLRLPTTMTKQEINDIVEGTIIEMGLQDCADRLIGNWHLRGISGGEKKRLSIALEILTRPCLLFLDEPTSGLDSASAYFVAQTLRNIAHDGRTVISSIHQPSSEVFELFDDLFLLSGGQTIYFGPAENAVEFFAKAGFPCPSRRNPSDHFLRCINSDFDTVTTAMMASRGTHEQKTLAPSTVNLSTANLSTAATKAVLVEKYRWSEYATCARARIKQMSNFDGRDYESKSKSQVKWWKQLSTLTQRSFVNMSRDVGYYWIRLTIYVALSLCVGTIFFEVGSSYQAIYARGACGAFISGFMTFMAIGGFPSFIEEMKVFYKERLNGYYGIAVYILSNFLSSFPFVAAMSFATGTITYYMVKFRPEFSHLLYICLDLLGCIAVVESSMMIIAALVPNFLMGLIIGAGYIGLMMMTAGYFRKIHDLPKFFWRYPISYINYGAWGLQVYLY* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3958 566 ProSitePatterns ABC transporters family signature. 161 175 IPR017871 GO:0005524
Psa7g3958 566 Pfam ABC transporter 40 189 IPR003439 GO:0005524
Psa7g3958 566 SMART AAA_5 47 246 IPR003593 -
Psa7g3958 566 Pfam ABC-2 type transporter 358 565 IPR013525 GO:0016020|GO:0140359
Psa7g3958 566 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 255 IPR027417 -
Psa7g3958 566 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 12 562 - -
Psa7g3958 566 CDD ABCG_EPDR 14 243 - -
Psa7g3958 566 Gene3D - 5 256 IPR027417 -
Psa7g3958 566 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 17 261 IPR003439 GO:0005524
Psa7g3958 566 PANTHER ABC TRANSPORTER G FAMILY MEMBER 13 12 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3958 Psa-Chr7 328003243 328010794 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3958 36 230 Calmodulin-binding Proteins AT2G36910 29.907 2.69e-10 61.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g3958 7 328003243 328010794 Psa7g3958 7 328003243 328010794 ECH