Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3911 ATGACACAGAACACCATCACTTACCCTCATTGGTATTCATCAAAAACTGGTGTTTACAATAGTATTCACTCTCCTGTAAACCTTCCAACCGACCCTTTTGTTGACATTGTTTCCTTCCTTTTTTCTCATTCTCATGATGGGCTTTTAGCTCTCATTGATTCCTCATCTGGGTCTTCCATTTCTTACTTAAAGCTGTTACCTTTAGTTAAAACCATGGCTTCTGGTTTGAACAAAATGGGTGTGAAACAAGGTGATGTTGTTTTGCTTTTGCTTCCAAATTCAATTTACTATCCTGTTATACTATTGGCTGTTCTTTATTTAGGTGCTGTTTTTACACCATTGAATCCTCTTAGTAGTGTTTCTGAAATTCACAAGCAGGTCAATGAGTGTGGTGTGAGTTTTGCTTTTACTGTACCTGAAAATATCAAGAAACTAGAGATATTAGCCTTTCCCGTTATTGCTGTGCCAGAAAACGACAAGGCTTTGAAGAATGAGTGTTTCTCTTGTTTTTGTAGCCTTATTTATGGTAACTTTGATTTGCCTCAAAGGCCAATTATTAAGCAAGAAGATACTGCTGGTGTATTGTATTCTTCTGGGACCACAGGTGGGAGCAAAGGAGTTGTTTTGACTCATAGAAATCTTATTTCTATGGTTCAGCATTTTGTAAGATTTGAAGCTTCGTTATACGAATACTCCTGTTCCAAGAGTGTGTATCTAGCTGTTTTGCCAATGTTCCATGTATATGGTTTATCGCTGTTCGCCGTTGGATTATTGTCGTTGGGTTCTACAATCGTTGTAATGAGGAAATTTGATATTGATGAGGTTATTAAAGTGATTGTGAAATATAATGTTACACACTTTCCTGTTGTTCCACCGATGTTATCGGCGTTGACAATGAAGGCAAAGGGTGTTAATGGATGTAAGTTGCAGAGTTTGAGACAGGTCTCCTGCGGTGCAGCGCCTTTGAGCACAGAAGTTATTAATGGTTTTGTCCGTGCTTTCCCTGATGTTGATTTTATACAGGGGTATGGAATGACCGAGTCGACCGCGGTAGGAACACGAGGCTTCAATACTGAAAAATTTCACAACTATTCTTCAATAGGATTGTTAGCTCCAAACATGGAGGCAAAAGTTGTAGACTGGATCAATGGTGCCCTTTTGCCCCCAGGCAGCAGCGGCGAGCTTTGGTTGAGAGGACCTTCGATCATGAGAGGATACTTGAATAACAAGGAAGCTACAATGTCAACAATCGATAAAGATGGTTGGCTACGAACTGGAGATATTGTTTATTTTGATCAAGATGGATATGTACATTTGTCTGACCGTTTGAAAGACATTATCAAATACAAGGGTTTTCAGATTGCTCCTGCTGATTTAGAAGCTGTGTTAATTTTGCATCCGGAAATAGTTGATGTTGCTGTTACAGCTGCCAAAGATGAAGAAATCGGGGAGATTCCAGTTGCATTTGTGGTCAAGAAGGTTGGAAGTCTACTTTCTCCGAAGCATGTTATTGATTACGTTGCCAAACAGGTTGCTCCATACAAGAAGGTTCGTAAAGTTTTCTTCACCAACAAGATACCAAGGTCTCCGACTGGGAAGATCCTCCGAAGAGAACTCACGCATTGCTTGAATTCTAAACTCTAA 1644 0.3972 MTQNTITYPHWYSSKTGVYNSIHSPVNLPTDPFVDIVSFLFSHSHDGLLALIDSSSGSSISYLKLLPLVKTMASGLNKMGVKQGDVVLLLLPNSIYYPVILLAVLYLGAVFTPLNPLSSVSEIHKQVNECGVSFAFTVPENIKKLEILAFPVIAVPENDKALKNECFSCFCSLIYGNFDLPQRPIIKQEDTAGVLYSSGTTGGSKGVVLTHRNLISMVQHFVRFEASLYEYSCSKSVYLAVLPMFHVYGLSLFAVGLLSLGSTIVVMRKFDIDEVIKVIVKYNVTHFPVVPPMLSALTMKAKGVNGCKLQSLRQVSCGAAPLSTEVINGFVRAFPDVDFIQGYGMTESTAVGTRGFNTEKFHNYSSIGLLAPNMEAKVVDWINGALLPPGSSGELWLRGPSIMRGYLNNKEATMSTIDKDGWLRTGDIVYFDQDGYVHLSDRLKDIIKYKGFQIAPADLEAVLILHPEIVDVAVTAAKDEEIGEIPVAFVVKKVGSLLSPKHVIDYVAKQVAPYKKVRKVFFTNKIPRSPTGKILRRELTHCLNSKL* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3911 547 Pfam AMP-binding enzyme 48 449 IPR000873 -
Psa7g3911 547 Gene3D - 19 444 IPR042099 -
Psa7g3911 547 Pfam AMP-binding enzyme C-terminal domain 459 533 IPR025110 -
Psa7g3911 547 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 546 - -
Psa7g3911 547 CDD 4CL 28 539 - -
Psa7g3911 547 PANTHER 4-COUMARATE--COA LIGASE-LIKE 6 8 546 - -
Psa7g3911 547 Gene3D - 445 545 IPR045851 -
Psa7g3911 547 ProSitePatterns Putative AMP-binding domain signature. 194 205 IPR020845 -
Psa7g3911 547 SUPERFAMILY Acetyl-CoA synthetase-like 45 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3911 Psa-Chr7 325563856 325567950 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3911 9 547 Monolignol Biosynthesis Gene Families AT4G19010 60.148 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3911 K01904 - gmx:100804808 850.892