Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3906 ATGGACCAACAACGTGTAGAAGGAGAAGTGGATAATGATAGTATAATTTTGACTTTTCGGTGGAATGCTACCAGGCGTGTCTATGAAATGCATCGTCATAGGAGAGGTGACAACAACCAACCACATTTTCTTAATGAGGATTGGGACATGCGCATTTATACTCAAAATGACCATATGATTTTTCGTGAAAATTCCAACAATCGGAGGGTAAGAAGAATTAGGATTGGCGAAGGAGAATCAGGCTCTGGAAACAGCATTACTTGCACCATATGTCTTGAAGAATTTCCTGTTGGGTTAGAAGTGATTCAATTGCCTAGACCTTGCTGTCATATGTTATCATCAAGATTGTATAATAGGTGGCTCCGCAGCTCTAACACATGCCCATGTGTCGTAAGGCCTGTTTCTTAA 408 0.4069 MDQQRVEGEVDNDSIILTFRWNATRRVYEMHRHRRGDNNQPHFLNEDWDMRIYTQNDHMIFRENSNNRRVRRIRIGEGESGSGNSITCTICLEEFPVGLEVIQLPRPCCHMLSSRLYNRWLRSSNTCPCVVRPVS* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3906 135 Pfam Ring finger domain 87 129 IPR001841 -
Psa7g3906 135 SUPERFAMILY RING/U-box 87 129 - -
Psa7g3906 135 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 50 134 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3906 Psa-Chr7 325040233 325040640 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3906 88 135 C3H Transcription Factor Family AT1G49850 43.750 7.20e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3906 - K16283 cam:101490108 118.242