Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3899 ATGAAAGAGCTTTGTAGAAATTTCCAGCGAGGCAGTTGTACTTATGGAGAAAGGTGTAGATTTCTTCATCAACAACCAAATCAACAGCAGCGAAAATCTAATGCCTTTGGTGGACAGACCAATAAAAACCCTTTTGGATTTGGGTCTGCCTCTGCTCCCAACCAACAGCCAAAGAACAATCCTTTTGGTTTTGGATCGCAGAATACCTCTCAGTCAAATGGGGCCCCTCGTTCTGACTCCAAACCAAACCAATTCCAGCCTTTTGAAAACAAATGGAATCGAACGTCATCCAAACCCCAGAATGGCACTCAACGTCCTTCTGATAACAATTCCCAAACAGTGAATCATAACTGCACAGATCCTGAGATTTGCAAGCGCCTGATCGCAGAAGATTTTGAGCAAGAGAAACCACTCTGGATACTTACATGCTATGGTCATTGCAAAGGTGCTCCTTGTGACATTATTGGAGATATTAGCTATGAAGAATTACGGGCATCTGCTTACGAGGATGCTAAGAATGGAATGAGTTTGCCATTAATTGTTGAAAAAGAGAGAAACATACTAAAATCCAAGTTGGTTGAGTTTGACAAACTACTTTCTGAACCCTACAAAATGCCTCTGAATTCTTCTCTTGACATTCAAAAGTACCAATCTAATGGAGCCAATGCAAATGCATTTTCACCAGCTACTCAAAATAATGGTCCTTTATCAGTCTCAAGCTTTAGCCAACTGGGTGCTTCACTGAACACTGGTTTTGAAAGGCCCTCTGCACCACAAGTGACCACTCCAGCACAGCCTAATTCCTTTGGAAGTGGAGGAAACTTTTTCTCATCCAACACAGGAAACCTATTCGGAAGTGGAATCTCTGGTGCTCAAAACAACACAGGAAACTCTTTCACATCCAACACAGGAAACTTATTCGGCAGTGGAGTCTCAGGTGCTCAAAACAACAACCCCTTTTCTACTCCAGCGGAGTTGACAATGTTTCCAGGATCAACTTCCCAATTCCAACAACCATCCATTGCGTTCAGTAATACTAGCTCCGCCACAATGCTTCAGACAGCATCATCAGATGTTCAGTTAAATACGCCCCAAGTGGAGAATGTGTCCGTAGATGACAGTATCTGGTTAAAGGAGAAATGGAATCCTGGAGAGATTCCAGAAGAAGCTCCTCCAGACAGATTTATTCGGTAA 1194 0.4271 MKELCRNFQRGSCTYGERCRFLHQQPNQQQRKSNAFGGQTNKNPFGFGSASAPNQQPKNNPFGFGSQNTSQSNGAPRSDSKPNQFQPFENKWNRTSSKPQNGTQRPSDNNSQTVNHNCTDPEICKRLIAEDFEQEKPLWILTCYGHCKGAPCDIIGDISYEELRASAYEDAKNGMSLPLIVEKERNILKSKLVEFDKLLSEPYKMPLNSSLDIQKYQSNGANANAFSPATQNNGPLSVSSFSQLGASLNTGFERPSAPQVTTPAQPNSFGSGGNFFSSNTGNLFGSGISGAQNNTGNSFTSNTGNLFGSGVSGAQNNNPFSTPAELTMFPGSTSQFQQPSIAFSNTSSATMLQTASSDVQLNTPQVENVSVDDSIWLKEKWNPGEIPEEAPPDRFIR* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3899 397 Gene3D - 1 84 - -
Psa7g3899 397 SUPERFAMILY CCCH zinc finger 3 27 IPR036855 GO:0046872
Psa7g3899 397 Pfam CCCH-type zinc finger 4 23 IPR041367 -
Psa7g3899 397 MobiDBLite consensus disorder prediction 91 114 - -
Psa7g3899 397 SMART c3hfinal6 2 25 IPR000571 GO:0046872
Psa7g3899 397 PANTHER MAKORIN-RELATED 2 395 IPR045072 -
Psa7g3899 397 ProSiteProfiles Zinc finger C3H1-type profile. 4 26 IPR000571 GO:0046872
Psa7g3899 397 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 16 2 395 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Psa7g3899 zf-CCCH_4 7.3e-09 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3899 K14321 - gmx:100814339 487.263