Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3896 ATGAATTTCAACAACGTGAAGATCCCAAAGGTTCCTGGTAGTGGAATCGCTGCTTTGCTTAAAGTTAGCATTATCGGTGGACTTGCTGTGTATGGGGCTACAAACACCTTGTATAATGTTGAGGGTGGTCATCGAGCTATTGTCTTTAACCGTCTTGTTGGTGTCAAAGATAAGGTCTATCCTGAAGGAACACATATTATGATCCCGTGGTTTGAGAGGCCTGTGATCTATGATGTTCGTGCACGACCTCACTTAGTGGAGAGCACTTCAGGAAGTCGGGATCTCCAAATGGTGAAAATTGGACTTAGAGTTCTTACTCGTCCTGTGCCAGACCAATTACCAACAGTTTATCGAACTCTGGGTGAGAATTATAATGAAAGGGTCCTGCCTTCTATTATACACGAAACTCTCAAATCTGTGGTTGCACAGTACAATGCCAGTCAGCTCATTACTCAGAGAGAGGCTGTTAGTCGTGAAATAAGGAAGATATTGACTGAAAGGGCATCACAATTTAACATTGCGTTGGATGATGTGTCAATCACAAGTTTGACATTTGGGAGGGAATTCACAGCTGCAATTGAAGCCAAGCAGGTTGCTGCTCAAGAAGCCGAGAGAGCTAAATTTGTTGTAGAAAAAGCTGAACAAGACAAAAGAAGTGCTGTTATTAGAGCACAGGGAGAAGCCAAGAGTGCTCAATTGATTGGTCAAGCTATTTCCAACAACCCTGCATTTATAACCTTAAGGAAAATTGAAGCTGCTAGGGAAATTGCTCAAACAATTTCAAATTCTGCCAACAAGGTTTTCTTGAATTCAGATGATCTCTTGCTGAACCTTCAGGATTTAAATTTGGAGCCCAGTGGGAAGAAATAG 870 0.4195 MNFNNVKIPKVPGSGIAALLKVSIIGGLAVYGATNTLYNVEGGHRAIVFNRLVGVKDKVYPEGTHIMIPWFERPVIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPVPDQLPTVYRTLGENYNERVLPSIIHETLKSVVAQYNASQLITQREAVSREIRKILTERASQFNIALDDVSITSLTFGREFTAAIEAKQVAAQEAERAKFVVEKAEQDKRSAVIRAQGEAKSAQLIGQAISNNPAFITLRKIEAAREIAQTISNSANKVFLNSDDLLLNLQDLNLEPSGKK* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3896 289 Pfam SPFH domain / Band 7 family 39 214 IPR001107 -
Psa7g3896 289 PANTHER PROHIBITIN-1, MITOCHONDRIAL-LIKE 1 289 - -
Psa7g3896 289 CDD SPFH_prohibitin 37 231 IPR000163 GO:0016020
Psa7g3896 289 Coils Coil 196 216 - -
Psa7g3896 289 Gene3D Band 7 domain 65 199 IPR036013 -
Psa7g3896 289 PRINTS Prohibitin signature 80 96 IPR000163 GO:0016020
Psa7g3896 289 PRINTS Prohibitin signature 98 117 IPR000163 GO:0016020
Psa7g3896 289 PRINTS Prohibitin signature 121 139 IPR000163 GO:0016020
Psa7g3896 289 PRINTS Prohibitin signature 144 160 IPR000163 GO:0016020
Psa7g3896 289 PRINTS Prohibitin signature 167 186 IPR000163 GO:0016020
Psa7g3896 289 PRINTS Prohibitin signature 192 215 IPR000163 GO:0016020
Psa7g3896 289 PRINTS Prohibitin signature 215 231 IPR000163 GO:0016020
Psa7g3896 289 SUPERFAMILY Band 7/SPFH domain 68 204 IPR036013 -
Psa7g3896 289 SMART PHB_4 36 197 IPR001107 -
Psa7g3896 289 PANTHER PROHIBITIN 1 289 IPR000163 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3896 Psa-Chr7 324292007 324295796 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3896 K17081 - gmx:100811958 518.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g3896 7 324292007 324295796 Psa5g6234 5 531264429 531266116 PCT