Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3890 ATGGCCAAGAAGAAGAAGAGTTGGTTTAATCTGGTGAAGAGGCTTTTCATATGGGACACACATTCCACACAAGAGAAGAAAGAGAAAAGAAGAAAATGGATATTTGGAAAGCTAAAAACCAACAAGTTACCTTCAATTACAGCTCCACCAACAACATCAAATGAAGCAGAGGTGGAGGAAAAGAGAAAGCATTCTCAAGTTGTTATGCTTAACGAAGTTTCACAATCTGCTTATCAAAAAAATCAAGATAGCTCAGAAGAATCTGAACCTGTTAAAACTAGGACTGGTGTTCCTCAATCAATATATCTGTGCCAGAGAGAGATTCAAGAATTTGCAGCCATCAAAATTCAAACTGCCTTTAGGGGCTACCTCGCAAAGAAGGCTTTGAGGGCATTGAAAGGAATAGTGAAACTTCAAGCTATCATTCGTGGGAGAGCAGTGAGACGACAAGCTATGAGTACTCTCAAGAGCTTGCAGTCTATTGTAAGTATTCAATCAAAGATATGTGCAAGGAGACTCCAAATGGTTGAAGGAAGATGGGATTCTGTTGAAGATGAAGAGATTCATTATTCTAAAGACAAGATCATTAAGATGGACTCCAACAGTGAAAGAAAGTGGGATGACAGCACTTTATTGAAGGAAGAGGTAGATGCTTTTTGCATGATCAAGAAAGAAGCCATTATTAAGAGAGAAAGAATAAAAGAATACACATTTAATCATAGAAGGTCAGCGGAGTCAGAAAGAACTAAAGTGAATGGAAGATGGAGGTACTGGCTAGAGCAATGGGTAGATACACAGCTTTCTAAAAGCAAAGAACTTGAAGATATAGACTCCGTTTTCAGCTCACATTCTAGGACAGGTGAAGAATTTAGCGGAAAACAACTAAATTTAAGAAATACTACTCAGAGACAAAATTCAAATCAACTAGAAGGAACGGATTCGCCAGTAGTTTTATCAAGAAAAACTTTTCCTCACAGGAGACAAAGTTCTATAGGAGAAGAGCAATCATTTTCAAGCTCCCCTGCAACTCCGGCATACATGGCTGCTACTGAATCAGCAAGAGCAAAAGCAAGATCAACAAGCTCACCAAAAGCAAGGTCATGGAATTATGACATCAACTCGGATAGCTATTTATCACCTTGCAAGAAAAAGCTATCGATTGTTTCATCGGTTAACAGTGAAGTGGTTAATAATGGTGGTAGAATGGGGAAGCTTAGTGGTTGTAACCAACAAAGGTCTCCAAGGTTGAAGGGTATTTCAGTGCCTATAAAATCAAGCAGAAGTATAAAGGATCTTAGCATTAATTCAGATTGCTCATTGTCTAATTGGGATAGACAAAGTTCCTTTAAATGA 1353 0.3829 MAKKKKSWFNLVKRLFIWDTHSTQEKKEKRRKWIFGKLKTNKLPSITAPPTTSNEAEVEEKRKHSQVVMLNEVSQSAYQKNQDSSEESEPVKTRTGVPQSIYLCQREIQEFAAIKIQTAFRGYLAKKALRALKGIVKLQAIIRGRAVRRQAMSTLKSLQSIVSIQSKICARRLQMVEGRWDSVEDEEIHYSKDKIIKMDSNSERKWDDSTLLKEEVDAFCMIKKEAIIKRERIKEYTFNHRRSAESERTKVNGRWRYWLEQWVDTQLSKSKELEDIDSVFSSHSRTGEEFSGKQLNLRNTTQRQNSNQLEGTDSPVVLSRKTFPHRRQSSIGEEQSFSSSPATPAYMAATESARAKARSTSSPKARSWNYDINSDSYLSPCKKKLSIVSSVNSEVVNNGGRMGKLSGCNQQRSPRLKGISVPIKSSRSIKDLSINSDCSLSNWDRQSSFK* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3890 450 ProSiteProfiles IQ motif profile. 133 160 IPR000048 GO:0005515
Psa7g3890 450 ProSiteProfiles IQ motif profile. 109 137 IPR000048 GO:0005515
Psa7g3890 450 Pfam IQ calmodulin-binding motif 112 130 IPR000048 GO:0005515
Psa7g3890 450 MobiDBLite consensus disorder prediction 285 365 - -
Psa7g3890 450 PANTHER IQ-DOMAIN 11 6 436 - -
Psa7g3890 450 MobiDBLite consensus disorder prediction 285 315 - -
Psa7g3890 450 Pfam Protein of unknown function (DUF4005) 329 402 IPR025064 -
Psa7g3890 450 Gene3D - 107 161 - -
Psa7g3890 450 PANTHER IQ-DOMAIN 5-RELATED 6 436 - -
Psa7g3890 450 MobiDBLite consensus disorder prediction 323 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3890 Psa-Chr7 323484569 323488005 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3890 4 450 IQD Protein Family AT5G13460 47.974 3.07e-119 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3890 - - gmx:100800192 615.15