Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3867 ATGGGGACTCTCCACCACTCCACCGCCTTCAGAACCGCCGTCGACGATCCCATCTTGCCCTTTCTCCGGTCAATCCAAATAGCCCTGGAAGATTTCAAATGTTCAACTCCGAATCTCAGCAAGTTACTCAAAGATTGCATTGATAAATTCAAGGACAATCACCGCTACCGAAACGATCCCAGATTTCTCAAAATCTGGTTCCTATATATGGATGCTAGTGCTGATTTTGATAGTGTTTTCAAAGGAATGCTGAACAGTAATGTATGTGCCAACGATGCTTCACTTTATGTGTATTCTGCATGTTTTTTTGAAGCAAAGGGTAGATTGTGTGATGCCAACACGATCTATAAGCTCGGGATTTCCAAAAATGCAGAGCCAGTTAAGTGGTTGAAGAAGGCACATACCTTATTTCTCAGTAGAATTTCTGAAATATGTAATGCTGCTTCAAGTCAGAAGGTTGATCATATAGAATCTGCTACATTGGAAAACAATTGCATTAATCCATGGGAAACCTCTACTATGAATGACCTTTTGAAGAAGATAAATCCTTTAATAACGAAATTTGATGGGTATCGTTCGAGCACTAAATCTTATACAGGAAAAGTGGCCTTATCCACTTTGAAGAGTGCATCAAGGAACAAAGTTATAGAGATAGGTGGAATGAAGTACCACATCAAGGGCTGTGCTGGACAGGGTGGTTTTGCTCAAGTATACAAGGCAAATGTCAACAACGATTCTGATGATGTTGTGGCACTAAAGATACAAAAGCCAGCTTTTGCTTGGGAATTTTACATGTATCGTCAGCTTGATCAGCGCATCTCTGGCAGAGAAAGGTCAAGCTATGGTTTTGCTCATAGAGTTCATCTCTTCTCTGACTTTAGCATACTCGTCTGTAATTATTTAGCTCATGGGACCCTACAGGATGTCATCAACTCATATGTGGTCATAGGAAAATCCATGGAAGAAGTATTGTGCATTTATTACACAACAGAAATGTTGCATATGATTGAAACTTTGCATGATGTTGGCTTGATTCATGGTGATTTCAAGCCTGATAATCTGCTCGTTCGCTATGCTAGTGGTAACCTCACAGAAGATGGGTTCTTAGACCGAACCGGTTCTTGGCATGATCAGGGTCTTTGCCTTGTTGACTGGGGAAGAGGGATTGATCTTCGTCTCTTTCCAGATCACACAACATTCAAGGCAGATTGTAGAACTTCTGGTTTTCGATGCATTGAGATGCAGGAGAGTAAGCCATGGAAATTTCAGGTAGATGCCTATGGCCTTTGCGGTGTTGTCTATGTGATGCTGCATAATTCCTATATGCAAATTGTTAAAAAAGAATCATCTGATGGGGGCTCTCTGTATCATCCCAGACTACCCTTTAAACGTTACTGGAACGTCGAGCTATGGAAGAATTTCTTCTCTAAGATGCTAAATAACTATCCCTCCCATGATGATAAGAGGTTGCTGCAGGAACTGAAGAAATCCTTTGAGGACTATATGAACTCTGATCCTCAACTTATAAGGAAACTCAAGGAGTTACTAGTGAAGCAAAGGGTTTCTCTATGCTCTGCTTAG 1581 0.4099 MGTLHHSTAFRTAVDDPILPFLRSIQIALEDFKCSTPNLSKLLKDCIDKFKDNHRYRNDPRFLKIWFLYMDASADFDSVFKGMLNSNVCANDASLYVYSACFFEAKGRLCDANTIYKLGISKNAEPVKWLKKAHTLFLSRISEICNAASSQKVDHIESATLENNCINPWETSTMNDLLKKINPLITKFDGYRSSTKSYTGKVALSTLKSASRNKVIEIGGMKYHIKGCAGQGGFAQVYKANVNNDSDDVVALKIQKPAFAWEFYMYRQLDQRISGRERSSYGFAHRVHLFSDFSILVCNYLAHGTLQDVINSYVVIGKSMEEVLCIYYTTEMLHMIETLHDVGLIHGDFKPDNLLVRYASGNLTEDGFLDRTGSWHDQGLCLVDWGRGIDLRLFPDHTTFKADCRTSGFRCIEMQESKPWKFQVDAYGLCGVVYVMLHNSYMQIVKKESSDGGSLYHPRLPFKRYWNVELWKNFFSKMLNNYPSHDDKRLLQELKKSFEDYMNSDPQLIRKLKELLVKQRVSLCSA* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3867 526 Gene3D - 8 158 - -
Psa7g3867 526 Pfam Protein kinase domain 223 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g3867 526 PANTHER BUB1 KINASE, ISOFORM A-RELATED 148 525 - -
Psa7g3867 526 PANTHER BUB1 KINASE, ISOFORM A-RELATED 14 151 - -
Psa7g3867 526 SMART mad3_bub1_i 9 120 IPR013212 -
Psa7g3867 526 Pfam Mad3/BUB1 homology region 1 13 120 IPR013212 -
Psa7g3867 526 ProSitePatterns Serine/Threonine protein kinases active-site signature. 344 356 IPR008271 GO:0004672|GO:0006468
Psa7g3867 526 SUPERFAMILY Protein kinase-like (PK-like) 222 484 IPR011009 -
Psa7g3867 526 Gene3D Transferase(Phosphotransferase) domain 1 221 524 - -
Psa7g3867 526 ProSiteProfiles BUB1 N-terminal domain profile. 6 158 IPR013212 -
Psa7g3867 526 ProSiteProfiles Protein kinase domain profile. 223 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g3867 526 SMART serkin_6 223 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g3867 526 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 14 151 IPR015661 GO:0007094
Psa7g3867 526 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 148 525 IPR015661 GO:0007094
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3867 222 442 CBL-interacting serine-threonine protein kinases AT2G26980 23.789 1.33e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK BUB Psa7g3867 Pkinase 9.6e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3867 K02178 - gmx:100802272 820.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g3867 7 321399527 321404748 Psa7g3867 7 321399527 321404748 ECH