Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3865 ATGAATTTCCAAGAGAAGCAAAGACTGGTCCGTGAAGTTGCTCGTCAGTCCAAAGATGCCCCGGATATTCTTCAATCATTTACTCGCCGGGAACTCCTAGAATTAATCTGTGCTGAATTAGGCAAAAAAAGGAAGTACACTGGATATACTAAGGGTCAGATGATAGAATATCTTCTGAAGTTAATTTCTAAGAAATCCAACTTGTACGTCGACCAAAATGCTCTTGCTCATTCTCCTGCCAAAATTTGCGTAGGATCTAAAAGGAAAAAAGGACCCCCTTCTCTTGATTTACGTAATGTTCAAATAGAGAACACGAATGAGGAAACAACAAAAACCTTAGTTTGTCGGAATGTGGCATGCAAAGCTACACTGTTACGTAATGTTCAAATAGAGAACACGAATGAGGAAACAACAAAAACCTTAGTTTGTCGGAATGTGGCATGCAAAGCTACACTGAAACCAGAAGATTCATTTTGCAAGAGATGTTCTTGTTGTATATGCCGTTGTTACGACGATAGCAAGGATCCTAGTCTGTGGTTGACCTGCACCTCTAATAAACCGAATGAAGAGTCATGTGGAATGTGGTGTCATTTGCAATGTGCTTTGAGTAATCAAATGTCTTGCATTTTGAAGGGAAGTCGCGGTGTAACCTTGGATGGAAGCTTCTGTTGTGTTTCTTGTGGAAAAATTAATGAATTAATGAGGACATGGAGAAAGCAATTATTGGTTGCCAGAGAAGCAAGAAGAGTGGATATACTCTCTGTGCGAATTTCCTTAGCCCACATAATTCTCACAGGAACGAAAGTATACACGGAAGTGCATAAGATCGTAGAAACCGTTCTCGAATTATTGGAGAATGAAGCGGGACCTCTGGATCACGTATATGCTAGGATGACGCGTGGAATTGTGAGCAGGCTCTCATGCGGTGCTGAGGTTCAGAAGTTGTGCTCTACTGCAGTTGAATGTTTTGATTTAAAGTTTTCTAAACTCTTTTCTAGTTGTGAAGAAAAGAAAGAAGCACCAACATGTTCTTTACATTTCGAAGAGTGTCTTCCCACCTCAGTGGTCATTGTGCTTGAATACAAAGACAAACTCTTAAAGAACTTTCTAGGCTGCAGGCTTTGGCACAGAATATCATCAACGGACTACCTCGAACAACCGACTTTCATTGTTTTGAGGCCCGAGAAAAGATTCAAATTAGAAAACCTCACACCTTCAACTGAGTACTCTTGCAAGGCTTCTATATTCAGTAGCACGGGGATTTTGGGTGCAGCAAAAGCTAAATAG 1287 0.4064 MNFQEKQRLVREVARQSKDAPDILQSFTRRELLELICAELGKKRKYTGYTKGQMIEYLLKLISKKSNLYVDQNALAHSPAKICVGSKRKKGPPSLDLRNVQIENTNEETTKTLVCRNVACKATLLRNVQIENTNEETTKTLVCRNVACKATLKPEDSFCKRCSCCICRCYDDSKDPSLWLTCTSNKPNEESCGMWCHLQCALSNQMSCILKGSRGVTLDGSFCCVSCGKINELMRTWRKQLLVAREARRVDILSVRISLAHIILTGTKVYTEVHKIVETVLELLENEAGPLDHVYARMTRGIVSRLSCGAEVQKLCSTAVECFDLKFSKLFSSCEEKKEAPTCSLHFEECLPTSVVIVLEYKDKLLKNFLGCRLWHRISSTDYLEQPTFIVLRPEKRFKLENLTPSTEYSCKASIFSSTGILGAAKAK* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3865 428 PANTHER OS08G0220600 PROTEIN 128 428 - -
Psa7g3865 428 PANTHER OS08G0220600 PROTEIN 1 127 - -
Psa7g3865 428 Pfam PHD - plant homeodomain finger protein 115 260 IPR032881 -
Psa7g3865 428 PANTHER VIN3-LIKE PROTEIN 2-RELATED 1 127 IPR044514 GO:0010048|GO:0040029
Psa7g3865 428 PANTHER VIN3-LIKE PROTEIN 2-RELATED 128 428 IPR044514 GO:0010048|GO:0040029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3865 Psa-Chr7 321343047 321344333 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3865 1 423 PHD Gene Family AT4G30200 36.000 3.33e-75 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3865 - - gmx:100785502 610.527