Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3846 ATGACTCAATGCAATGAGGCTCAAAATAATCATAGCTTCACAATTGATGGAAGAAAGGACAGCTTAATTAGAACTTGTCTCACATGTGGTCATCATATCAAATGCCAAGATCAGGGTGGTGGAATTAATGACTTACCTGGATTACCTGCTGGAGTGAAGTTTGATCCAACAGATCAAGAGATTCTTGAACATTTGGAGGCAAAAGTGAGGTCTGATATTCATAAACTTCATCCTCTAATTGATGAGTTCATTCCTACTCTTGAAGGAGAGAATGGAATTTGCTATACTCATCCAGAGAAATTGCCAGGTGTAAGCAAAGATGGCCTAATCCGCCATTTCTTCCACCGACCATCGAAGGCATACACAACAGGAACAAGAAAGAGAAGAAAAGTACATTCAGATCACGAAGATGGCAGTGAAACACGTTGGCACAAAACAGGAAAAACAAGACCAATCTACAACAGTTCCAAGTTAAAAGGCTACAAAAAAATCCTCGTACTTTACACTAACTATGGAAAGCAAAGAAAACCAGAGAAAACAAGTTGGGTAATGCATCAGTATCATCTTGGGAGTGATGAAGAAGAGAAAGAAGGTGAGTTAGTTGTGTCCAAGGTTTTCTATCAAACTCAACCTAGACAATGTGGTGGCAACTCATTGATGATGAAAGATCCCATTGTTGGGAAGAGTTTGAAGGGTCAAAGTGGGAATAATATTGAGGTAATGAATGGTGAAAAGAGTATTAATGGATCATTTGTTGAGTATTATCATTCAAATTTCATATCATTTGGTCAAGGGAATCAACATAGATCATCTAGTAATGGACAAGTGATTTCACATTTTGAAGGTGCTCCTATATGA 858 0.38 MTQCNEAQNNHSFTIDGRKDSLIRTCLTCGHHIKCQDQGGGINDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHSDHEDGSETRWHKTGKTRPIYNSSKLKGYKKILVLYTNYGKQRKPEKTSWVMHQYHLGSDEEEKEGELVVSKVFYQTQPRQCGGNSLMMKDPIVGKSLKGQSGNNIEVMNGEKSINGSFVEYYHSNFISFGQGNQHRSSSNGQVISHFEGAPI* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3846 285 Pfam No apical meristem (NAM) protein 49 189 IPR003441 GO:0003677|GO:0006355
Psa7g3846 285 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 281 IPR044799 GO:0003700
Psa7g3846 285 MobiDBLite consensus disorder prediction 127 147 - -
Psa7g3846 285 MobiDBLite consensus disorder prediction 122 148 - -
Psa7g3846 285 Gene3D NAC domain 57 212 IPR036093 GO:0003677|GO:0006355
Psa7g3846 285 SUPERFAMILY NAC domain 44 208 IPR036093 GO:0003677|GO:0006355
Psa7g3846 285 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 281 - -
Psa7g3846 285 ProSiteProfiles NAC domain profile. 48 208 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3846 Psa-Chr7 320532709 320535235 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3846 24 217 NAC Transcription Factor Family AT4G28500 79.381 3.02e-115 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Psa7g3846 NAM 4.1e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3846 - - gmx:100797459 483.026