Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3835 ATGGATCATGTGAGAAATGATCAACCTTCTACCTCTACAAACAAAGTTGAAAGAAGACTTGTGGAGAAAAACAGAAGAAATCAGATGAAGATTCTCTACACCAAACTCAACTCTCTTCTCCCTAACTATAACCCCAAGGAGTTAGTGTTGGCATTACCGGACCAAGTGGATGAAGCCATAAACTACATTAAGAGTTTAGAGGCAAATGTGAAGATGGCTGAGGAGAAGAAAGAGAGATTGTTAATGGAGAAGAAGAAAAGGTCGCGTGAATGTTGTTTTGGTGTCCCAAAATTGCCATGTTTTGAAATTCATGAATTTGGTTCTTCACTGCAAATCGTTCTTACGTGTGGTTTAGATAATCAGTTCATTTTCTATGAAATAATTCGTGTGTTGCATGAAGAGAATGTAGATGTCAAGAGTGTCAATTCCTCGACTGTTAGAGATAATTCATTCCTACATGTCGTGCATGCTGAGATTCCTCAAACTTATGTTCAATTTGGAGCGACAAAAGTGAGTGAAAGATTGAAAAGGTTTGTGAGTGGATCATCCAGTGATGTGGAAATACAGCCTCATGAGTTATGGGATTTTGAAATTGTAAATGATGTGTGGAGTTTGTAG 618 0.3786 MDHVRNDQPSTSTNKVERRLVEKNRRNQMKILYTKLNSLLPNYNPKELVLALPDQVDEAINYIKSLEANVKMAEEKKERLLMEKKKRSRECCFGVPKLPCFEIHEFGSSLQIVLTCGLDNQFIFYEIIRVLHEENVDVKSVNSSTVRDNSFLHVVHAEIPQTYVQFGATKVSERLKRFVSGSSSDVEIQPHELWDFEIVNDVWSL* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3835 205 MobiDBLite consensus disorder prediction 1 20 - -
Psa7g3835 205 Pfam Helix-loop-helix DNA-binding domain 15 67 IPR011598 GO:0046983
Psa7g3835 205 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 13 66 IPR011598 GO:0046983
Psa7g3835 205 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 11 186 - -
Psa7g3835 205 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 11 186 IPR015660 GO:0003700|GO:0006357
Psa7g3835 205 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 13 83 IPR036638 GO:0046983
Psa7g3835 205 Coils Coil 56 90 - -
Psa7g3835 205 Gene3D - 5 92 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3835 Psa-Chr7 320048290 320049388 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3835 8 181 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 40.314 2.17e-28 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Psa7g3835 HLH 8.9e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3835 - - gmx:100817883 259.225