Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3819 ATGGCTCAATTGCCACCCAAAGTTCCAATTCCAAACATGACACAACCTTGGCCTGAATTTTCTTCTCATCAAAAAATGCCTAACCTTAAAACTGTTCCACCACTCAATGCTTCAAACTTCTCCAACAATCAACAAAACCCTTCATGGGTGGATGAGTTTCTCGACTTCTCGTCCACCAGACGAGGGGCTCACAGACGGTCGGCGAGTGATTCTGTGACGTTCATTGAGGCGTCAATGATGGAGCATTGTCGCCGTAGAGACAGGGACGGTGAGTTTGAAAGGTTTGATGATGAACAATTGATGTCTATGTTTGGCGTGGATGAGGTTTCCGGGAAAAACATGATGCAGCCGCCAGCCGCAGCCGGAGCAGCTACATTGTACTCTAACTCAAACCCTTCAACTCCTTCTGATAATAACAGCATCAACGAAGAGGAGGAGGAGGATGAAAAGCATCATCAACAACAGAAACAATTGAAGCATGAATCTGATGAGGATGAATTTGATGAATGCAAACAGGAAACCGCACGAGTCGTCAATGATGAGGATGAAGATACTAACGGAAACACATCTTATTCAAGTCAGAAAATTACTGACCCCAAGAGGGTCAAAAGAATCTTGGCAAATAGACAATCCGCACAGAGATCAAGAGTGAGGAAACTGCAATACATATCAGAGCTTGAGAGAAGTGTAACTTCATTACAGGCAGAAGTATCAGTACTGTCACCACGAGTAGCATTTCTGGATCATCAGAGGTTGCTTCTAAATGTTGATAACAGTGCTCTCAAGCAAAGAATCGCAGCTCTTGCCCAAGACAAAATCTTCAAAGATGCTCATCAAGAGGCATTAAAGAGGGAGATAGAAAGGCTGAGACAAGTTTATCATCAACAAAACATCAAGAATAATGCTTCACCATCTCCATCACCTAAACCACCTTGTGATAATGATACTCACATTGAAAATGAACATCTTATCAATGTCTGA 981 0.4271 MAQLPPKVPIPNMTQPWPEFSSHQKMPNLKTVPPLNASNFSNNQQNPSWVDEFLDFSSTRRGAHRRSASDSVTFIEASMMEHCRRRDRDGEFERFDDEQLMSMFGVDEVSGKNMMQPPAAAGAATLYSNSNPSTPSDNNSINEEEEEDEKHHQQQKQLKHESDEDEFDECKQETARVVNDEDEDTNGNTSYSSQKITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNIKNNASPSPSPKPPCDNDTHIENEHLINV* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3819 326 Pfam bZIP transcription factor 200 244 IPR004827 GO:0003700|GO:0006355
Psa7g3819 326 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 198 250 IPR004827 GO:0003700|GO:0006355
Psa7g3819 326 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 321 - -
Psa7g3819 326 MobiDBLite consensus disorder prediction 297 318 - -
Psa7g3819 326 Coils Coil 279 299 - -
Psa7g3819 326 SMART brlzneu 196 260 IPR004827 GO:0003700|GO:0006355
Psa7g3819 326 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 203 218 IPR004827 GO:0003700|GO:0006355
Psa7g3819 326 Gene3D - 199 270 - -
Psa7g3819 326 SUPERFAMILY Leucine zipper domain 200 254 IPR046347 GO:0003700|GO:0006355
Psa7g3819 326 CDD bZIP_plant_RF2 201 251 IPR044759 GO:0003700|GO:0006355
Psa7g3819 326 PANTHER BASIC LEUCINE ZIPPER 34 1 321 - -
Psa7g3819 326 MobiDBLite consensus disorder prediction 145 183 - -
Psa7g3819 326 MobiDBLite consensus disorder prediction 126 197 - -
Psa7g3819 326 Coils Coil 141 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3819 Psa-Chr7 319421757 319424678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3819 1 277 bZIP Transcription Factor Family AT3G58120 54.181 7.06e-85 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa7g3819 bZIP_2 3.5e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3819 - - gmx:778128 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g3819 7 319421757 319424678 Psa7g3819 7 319421757 319424678 ECH