Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3794 ATGCGTCCACCCATGAGAAGAATCAACTACAATGTCGGAGACAAAGTGGAAGTATGCAGTAGAGAAGAAGGGTTTGTCGGTTCATACTACAATGCCACAATTATTTCGTGTCTTCAAAATGGAAAATATGTGATTCGTTACAAGAATCTCTTGTTAGATGATGAGTCTGGACCTCTCATAGAGATGATTTATTCAAGAGAACTCCGTCCATCACCACCACGTGTTCGCCATCCACATGAATTTCATCTCAACCAAAGAGTGGACGTTTTTGATAACGATGGTTGGTGGTTAGGTGAAATCACTAGTGAGAGATTTTGTTTTGAAAATTGTTATTACTATCGGGTGTACTTCAACACTACCTTTGAAACGATTTGTTACCCTCAAGATCGAATTAGGGTTCATCATGAATGGCTTTACGGAGAGTGGATATTGGAAGCACAATTCATAACAACATCGTGA 459 0.3943 MRPPMRRINYNVGDKVEVCSREEGFVGSYYNATIISCLQNGKYVIRYKNLLLDDESGPLIEMIYSRELRPSPPRVRHPHEFHLNQRVDVFDNDGWWLGEITSERFCFENCYYYRVYFNTTFETICYPQDRIRVHHEWLYGEWILEAQFITTS* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3794 152 PANTHER - 8 147 - -
Psa7g3794 152 Pfam Agenet domain 13 73 IPR008395 -
Psa7g3794 152 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 8 147 - -
Psa7g3794 152 Gene3D - 2 77 - -
Psa7g3794 152 SMART agenet_At_2 8 76 IPR014002 -
Psa7g3794 152 SMART agenet_At_2 79 139 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3794 Psa-Chr7 318013671 318014129 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3794 20 137 PHD Transcription Factor Family AT5G58610 29.710 2.02e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3794 - - cam:101489110 196.438