Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3784 ATGAGGAACACCGAAGGAGGACACATAGTTCGATCCACCGGTAAGAAAAATCGCCACAGCAAGGTTTACACATCGAAAGGACCCCGCGATCGGAGGGTTCGTCTCTCGGCACACACAGCCATTGAATTCTACGATGTTCAAGATCGTCTTGGCTATGACAGACCAAGTAGGGCAGTGGATTGGCTCATCAGGAAAGCAAAACCTTCCATTGACAAGCTCGCCGAGCTTCCGTCGTGCCAACCTATCGGCGAAACTCAAACCCTAATGCCTCAAGAGGATGAACAGAATGTAGCTGATGTGTCAACTGATATGGTTATTGGAGAATCATCAAATGGTTACAGTTTTCATCTGTTAAGTCAATTGAGTGAGGATCAAGAAAACCCTAGTTCAGGTTTCATCGATCCTAATCCTATACCTTTCTTTCCAACTACCTCTTCTACTTCTTCATCTATCCATTTTCAGAACTACCCTTCTGAAAACCTTGGGCTCTCTCTTCATTCCTTCCAAGATCACAGTGGTTTCATTCCTTGGCAATCACAACAACCATGTGAAAACCAAAACCAAAACCATAATCAATCACTCTTTGATAACGAGTATCATGTGGATTGGAACAATGAAACAACCAATGATTATATTACGAAAGTAGGGTTCATGGTAAACTCAAATCCATTTCTAGGACAAGGTTCAGCTTACACTCCTAATGAGAGACTTCAGTCGAACTTTTCGCATTCGGCTCGGTCATGGAATGAAATTCCTATGGATTCTTCTTCAGAGGTTCATCAAAGATCACAAAAAGTTCAGCATCAAGCTTCAATCTTTGGAAGCAGGTTTGTTTCTGATAGATTACCAGGTTTCGCCATTCTTGATACAATTCAAGATGGAGAAGAGGGTCATGGAATTTCTTCTAATAAGCCATCGTCTGTTTCTCCTAACCACAACTGA 942 0.4214 MRNTEGGHIVRSTGKKNRHSKVYTSKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSRAVDWLIRKAKPSIDKLAELPSCQPIGETQTLMPQEDEQNVADVSTDMVIGESSNGYSFHLLSQLSEDQENPSSGFIDPNPIPFFPTTSSTSSSIHFQNYPSENLGLSLHSFQDHSGFIPWQSQQPCENQNQNHNQSLFDNEYHVDWNNETTNDYITKVGFMVNSNPFLGQGSAYTPNERLQSNFSHSARSWNEIPMDSSSEVHQRSQKVQHQASIFGSRFVSDRLPGFAILDTIQDGEEGHGISSNKPSSVSPNHN* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3784 313 ProSiteProfiles TCP domain profile. 15 73 IPR017887 -
Psa7g3784 313 MobiDBLite consensus disorder prediction 1 30 - -
Psa7g3784 313 PANTHER TRANSCRIPTION FACTOR TCP4 4 312 - -
Psa7g3784 313 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 4 312 IPR005333 GO:0003700
Psa7g3784 313 Pfam TCP family transcription factor 13 125 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3784 Psa-Chr7 317682247 317683218 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3784 4 169 TCP Transcription Factor Family AT2G31070 46.316 9.06e-42 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Psa7g3784 TCP 1.6e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3784 - - gmx:100814907 290.041