Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3752 ATGTCAGGTGGCCCTATTTCTCAGGATTGGGAACCAGTCGTCATCCGCAAGAAAGCTCCCAACGCCGCCGCCAAAAAGGATGAGAAAGCCGTTAACGCCGCTCGCCGTGCCGGCGCCGATATCGATACCGTCAAGAAATATAATGCTGCCACAAACAAAGCTGCATCTAGCAGCACTTCATTGAACACTAAAAGGCTGGATGAGGATACAGAGAATCTAGCCCATGATCGTGTACCAACTGAACTGAAGAAGGCTATAATGCAAGCTAGGATGGACAAAAAGCTTACTCAGTCTCAGCTTGCTCAAATCATCAATGAAAAGCCTCAAGTGATCCAAGAGTACGAGTCAGGCAAAGCCATTCCAAATCAGCAGATAATTGGCAAGTTGGAGAGAGCCCTTGGAGCTAAACTGCGTGGCAAGAAATGA 426 0.4789 MSGGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGADIDTVKKYNAATNKAASSSTSLNTKRLDEDTENLAHDRVPTELKKAIMQARMDKKLTQSQLAQIINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3752 141 ProSiteProfiles Cro/C1-type HTH domain profile. 86 140 IPR001387 -
Psa7g3752 141 Pfam Helix-turn-helix 86 136 IPR001387 -
Psa7g3752 141 MobiDBLite consensus disorder prediction 51 76 - -
Psa7g3752 141 SUPERFAMILY lambda repressor-like DNA-binding domains 79 137 IPR010982 GO:0003677
Psa7g3752 141 Gene3D - 70 141 IPR010982 GO:0003677
Psa7g3752 141 SMART mbf_short4 85 140 IPR001387 -
Psa7g3752 141 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 1 141 - -
Psa7g3752 141 PANTHER MULTIPROTEIN BRIDGING FACTOR 1B 1 141 - -
Psa7g3752 141 CDD HTH_XRE 84 134 IPR001387 -
Psa7g3752 141 Pfam Multiprotein bridging factor 1 8 78 IPR013729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3752 Psa-Chr7 315696393 315699466 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Psa7g3752 MBF1 6.6e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3752 K03627 - pop:7455943 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g3752 7 315696393 315699466 Psa7g3752 7 315696393 315699466 ECH