Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3734 ATGGCATTGGCTTGCAATAGCCTCCAAAGCAGCTCTTCTTCACCAAAGATGAGATGGAAATATGATGTGTTTGTGAGCTTTAGAGGAGAAGACACTCGCAACAATTTCACCGATCACCTCTTTGGCGCTCTTCGTAAGAAAGCTATTATTACCTTCAGGGATGATACAAAGCTCAAGAAAGGGGAAGATATATCACTTGAGCTTCTACAAGCTATTGAAGGATCCCAAATTTTGATTGTTATTTTCTCAACAAACTATGCTTCTTCCACATGGTGCTTGCAAGAACTAGCAAAAATTGCTGCATGCATTGAAGTTCCAGGACAATCTGTTCTACCTATTTTCTTTGATGTCAGTCCTTCTGAGGTACGAAAGCAATGCGGAGATTATGAAAAAGCCTTTCAAGGGCATGAAGAAAGATTCAAAGCAACTTTAGAGAAAGTGCAAAGATGGAGAGGAGCTCTAACACAAGTAGCCAATCTCTCTGGTTGGGACTTAAGGGATAAGCCACAATATGCAGAGATTGGAGAAATTACTAAAAAGGCAACAGAAAACCTTGAAGCCATGATGATGAAGTATGATTCAGAAAAGGATATAGAAATACAACAGATGACAACATTGAGGGCCGAAGCTTTAGCACAAATGAGTCGCCTTAAATTGCTCAGGTTGTTGACGTTTAATTTCTCAGGAAGTCTCAATTTTCTTTCAAGTGAATTGGGGTATCTACATTGGGATAAATATCCTTTCACTAGTTTGCCATCAAGTTTTCAGGCATATAAACTTGTTGAACTGATCCTACGTCATAGCAACATTAGGAAACTATGGGAAGGCACAAAGTCTCTACCTAATTTGACACGTATTGATCTCAGTTACTCAAAGAATCTTAATATGATGCCAAATTTTGAGGAGACTCCAAATCTTGAGAGCCTAGATCTTGTAGGATGTATAAAACTCGTGAAGATTGATCCATCCATTGGTACATTAAGGAGGCTTTCCAGATTAAATTTGCAAAATTGTACAAATTTGGTCAGTATTCCTAACAACATTTTTGGTCTGAATTCTCTCGAACATTTAGATCTCTCAGGCTGTCCAAACTTATTTAAGAATCTGTTAGATATACAAAGCCAAATAGAACATCTGGAGATGCTTGATAACAAGGAAATCAGTACCCAATACCAACCAACATCCTTCATCTACAAATTTCTAAAGCCGCACTTTCGATATTTGACTTTTCAAAAACCTGAAGATTCAGTTGGTTTATTGTTGCCTTCATTGTCTCGTTTGTCATGTTTGCAATATCTTGACCTGAGTTTCTGCAATCTTTTTCAAATCCCTTATGCAATTGGGTTGTTACATTGCTTAGAAACCCTATATTTGGGGGGAAACAATTTTGTGACACTACCTTCTAGCTTGAAAGAACTTTCCAAACTTAAACAATTAAACTTGCAGCACTGTAAGCGCCTGAAATATTTTCCTGAGCTCCCATCAAAAACTGTTTTGCCAGTAAGAAAAACATGTTTTGGTAGATATTCAGCTGGGTTATATATATTTGACTGCCCCAGTTTAGTTGAGATGGAAAGCTATTTTGGAATTGCTTTTTCTTGGATGATACAACTTCTTCAGGTTCACATGCAATCCGAGATCCCAAGGACAGACATTACAATTGTTATTCCCAAAACTCAAATTCCAAAGTGGTTCACCAAACAAAGTGTAGGCAGTTCAATAAGCATCGATCCATCATCCATTATGCATGACAAGTGGTTCACCAAACAAAGTGTAGGCAGTTCAATAAGCATCGATCCATCATCCATTATGCATGACAAGAATTTGATAGGCATCGCTTGCTGCTTAACATTTGTAGCGCATGATAATCCTACTAATTATGGTTCACCAAACAAAGTGGAGGAATTTATTGATTTGATAAGTCGTGCCACAAAGGGATGGGATGATCACGAGGGATGGGATGATATTAGTGGTATTGAATTGAGTGCTACAGTTTATCAGCCCTTTGGTTTGCACTTGGAGGTAAAAAATTGTGGTTATCGTTGGATATTTAAGGAGGACCTGGAACAATTAAACCCACAAAAGATGTACAAGGGAAATTCGTCAGTTCAGCCATATTATTGA 2124 0.379 MALACNSLQSSSSSPKMRWKYDVFVSFRGEDTRNNFTDHLFGALRKKAIITFRDDTKLKKGEDISLELLQAIEGSQILIVIFSTNYASSTWCLQELAKIAACIEVPGQSVLPIFFDVSPSEVRKQCGDYEKAFQGHEERFKATLEKVQRWRGALTQVANLSGWDLRDKPQYAEIGEITKKATENLEAMMMKYDSEKDIEIQQMTTLRAEALAQMSRLKLLRLLTFNFSGSLNFLSSELGYLHWDKYPFTSLPSSFQAYKLVELILRHSNIRKLWEGTKSLPNLTRIDLSYSKNLNMMPNFEETPNLESLDLVGCIKLVKIDPSIGTLRRLSRLNLQNCTNLVSIPNNIFGLNSLEHLDLSGCPNLFKNLLDIQSQIEHLEMLDNKEISTQYQPTSFIYKFLKPHFRYLTFQKPEDSVGLLLPSLSRLSCLQYLDLSFCNLFQIPYAIGLLHCLETLYLGGNNFVTLPSSLKELSKLKQLNLQHCKRLKYFPELPSKTVLPVRKTCFGRYSAGLYIFDCPSLVEMESYFGIAFSWMIQLLQVHMQSEIPRTDITIVIPKTQIPKWFTKQSVGSSISIDPSSIMHDKWFTKQSVGSSISIDPSSIMHDKNLIGIACCLTFVAHDNPTNYGSPNKVEEFIDLISRATKGWDDHEGWDDISGIELSATVYQPFGLHLEVKNCGYRWIFKEDLEQLNPQKMYKGNSSVQPYY* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3734 707 SMART till_3 20 160 IPR000157 GO:0007165
Psa7g3734 707 Pfam Leucine Rich Repeat 259 278 IPR011713 -
Psa7g3734 707 ProSiteProfiles TIR domain profile. 19 185 IPR000157 GO:0007165
Psa7g3734 707 Gene3D - 15 192 IPR035897 -
Psa7g3734 707 PANTHER TMV RESISTANCE PROTEIN N-LIKE 17 200 - -
Psa7g3734 707 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 17 200 - -
Psa7g3734 707 SMART LRR_typ_2 427 449 IPR003591 -
Psa7g3734 707 SMART LRR_typ_2 450 473 IPR003591 -
Psa7g3734 707 SMART LRR_typ_2 327 351 IPR003591 -
Psa7g3734 707 Pfam TIR domain 20 166 IPR000157 GO:0007165
Psa7g3734 707 Gene3D Ribonuclease Inhibitor 194 395 IPR032675 -
Psa7g3734 707 Pfam Leucine Rich Repeat 353 372 IPR001611 GO:0005515
Psa7g3734 707 Gene3D Ribonuclease Inhibitor 407 496 IPR032675 -
Psa7g3734 707 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 163 IPR035897 -
Psa7g3734 707 SUPERFAMILY L domain-like 201 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3734 Psa-Chr7 314460158 314464200 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3734 185 479 WRKY Transcription Factor Family AT4G12020 33.333 5.28e-27 116