Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3718 ATGAAGGTTGAGATAAGGGTATATGTGATGGTTGAGGTGTTCTGTTTTCCAGCACAACCTCATAGAAGACAACAAACTTATGTTCACAATGAAGAAATGGGAAGAAGAGGTTTCAATCCAACGAGACTTAGACAAATTTTCCAGCATTCACCTATAAGATCAACATCAATGCATCAAAGAAACACGCATGTTCCACATGTTTTAGAAGATTCCAAATCAACTATTTTAAGTAAGTTACGGAAAGTAGTCTATAACCCTGCACCAACGCGTTTAGCTAGAAAAGTGAGCTTATATTATAGAGGAAATGCTCCAAATGATTTGAAAGAGAGTATGAAAGAAAACAAGGAAGATGGTATGGGATGTGCTATTTGCTTGGAAGATTTTGAAGCTAAAGAAGAAGTGATGCTTACTCCATGCAACCACATGTTTCATGAGGATTGTATTGTAACTTGGTTAACAAGCAAAGGTCAGTGTCCTGTTTGTAGATTTGTAGTTTATGAGGAAGTGAAGGAAAATTCATCTTCCTTTAATAGGAATGAAATTGCCAATTGGGAACCCAATGGCATGATCTCTGAAGAGCTTTTGTCAATTTTAAGGGCCATGGAAGAAGCTTTTCATTTAGACCGTATGAATTAA 636 0.3648 MKVEIRVYVMVEVFCFPAQPHRRQQTYVHNEEMGRRGFNPTRLRQIFQHSPIRSTSMHQRNTHVPHVLEDSKSTILSKLRKVVYNPAPTRLARKVSLYYRGNAPNDLKESMKENKEDGMGCAICLEDFEAKEEVMLTPCNHMFHEDCIVTWLTSKGQCPVCRFVVYEEVKENSSSFNRNEIANWEPNGMISEELLSILRAMEEAFHLDRMN* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3718 211 SMART ringv_2 120 162 IPR011016 GO:0008270
Psa7g3718 211 ProSiteProfiles Zinc finger RING-type profile. 121 162 IPR001841 -
Psa7g3718 211 SUPERFAMILY RING/U-box 113 168 - -
Psa7g3718 211 SMART ring_2 121 161 IPR001841 -
Psa7g3718 211 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 14 211 - -
Psa7g3718 211 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 14 211 - -
Psa7g3718 211 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 106 179 IPR013083 -
Psa7g3718 211 CDD RING-H2_PA-TM-RING 121 162 - -
Psa7g3718 211 Pfam Ring finger domain 121 162 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3718 Psa-Chr7 313987886 313989038 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3718 75 205 C3H Transcription Factor Family AT3G58720 50.365 1.35e-40 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3718 - K11982 gmx:100810607 244.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g3718 7 313987886 313989038 Psa7g3718 7 313987886 313989038 ECH