Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3716 ATGAGTCGCAACATGAACAACTTCACGCCTTTGCCGGGGCTTTGGAGAACAGGTTCTAGAGCCTATGATGATGCTCCTCACACTTCCAGTAATACTCATGAATTCAATGAAGTTCCTGTGTTTTACCGATCTCGTCTCTCTACTAGAACCAATGATGACAGGAGTTTAGGTGCACAAGATCCATTACGGTTGTGGGAAGTCAGAAGAACTCCTACAGAACATCATAGAACACCAAATTTTCCAGCACAACCTCATAGAAGACAACAAACTTATGTTCACAACGAAGAAATGGGAAGAAGAGGTTTCAATCCAACGAGACTCGGACAAATTTTCCAGCATTCACCTGTAAGATCAACATCAATGCATCAAACAAACACGCACGTTCCACATGTGGTAGAAGATTTCAAATCAACTATTTTAAGTAAGTTACGGAAAGTAGTATATAATCCCGCGCCAACGCGTTTAGCTAGAAAAGTGAGCTTATATTATAGAGGCAATGCTTCGAATGATTTGAGAGATAGTGTGAAAGAAAAGAAGGAAGATGGTATGAGATGTGCTATTTGCTTGGAAGATTTTGAAGCTAAAGAAGAAGTGATGCTTACTCCATGCAACCACATGTTTCATGAGGATTGTATTGTAACTTGGTTAACAAGCAAAGGTCAGTGTCCTGTTTGTAGGTTTGTAGTTTATGAGGAAGTGAAGGAAAATTCATCTTCCTTTAATAGGAATGAAATTGCCAATTGGGAACCCAATGGCATGATCTCTGGAGAGCTTTTGTCAATTTTGAGGGCCATGGAAGAAGCTTTTCATTTAGACCGTATGAATTAA 828 0.3961 MSRNMNNFTPLPGLWRTGSRAYDDAPHTSSNTHEFNEVPVFYRSRLSTRTNDDRSLGAQDPLRLWEVRRTPTEHHRTPNFPAQPHRRQQTYVHNEEMGRRGFNPTRLGQIFQHSPVRSTSMHQTNTHVPHVVEDFKSTILSKLRKVVYNPAPTRLARKVSLYYRGNASNDLRDSVKEKKEDGMRCAICLEDFEAKEEVMLTPCNHMFHEDCIVTWLTSKGQCPVCRFVVYEEVKENSSSFNRNEIANWEPNGMISGELLSILRAMEEAFHLDRMN* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3716 275 ProSiteProfiles Zinc finger RING-type profile. 185 226 IPR001841 -
Psa7g3716 275 SUPERFAMILY RING/U-box 176 232 - -
Psa7g3716 275 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 2 275 - -
Psa7g3716 275 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 2 275 - -
Psa7g3716 275 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 170 242 IPR013083 -
Psa7g3716 275 Pfam Ring finger domain 184 226 IPR001841 -
Psa7g3716 275 SMART ring_2 185 225 IPR001841 -
Psa7g3716 275 CDD RING-H2_PA-TM-RING 185 226 - -
Psa7g3716 275 SMART ringv_2 184 226 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3716 Psa-Chr7 313964770 313965897 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3716 139 269 C3H Transcription Factor Family AT3G58720 51.095 3.48e-39 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3716 - K19041 gmx:100802085 305.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g3716 7 313964770 313965897 Psa7g3716 7 313964770 313965897 ECH