Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3699 ATGGATCAACAAAACCAAACCATGCGTTTGGTTCTTTCCACTGATGCTAAGCCTAGGTTGAAATGGACTCATGAACTTCACCAAAGATTCACTGATGCTATTCACCAACTTGGAGGTGCAGAAAAAGCAACACCGAAGAGTTTGATGAGGGCGATGGCGATTCCGGGACTCACTTTGTATCATCTCAAGAGTCATTTACAGAAATATAGACTTGGAAAAAACCAACTGATAGAAACCTGTTCTGATGACAAACAAGATTACATAGAGATTCAAAGTAGTGACAGTCAATGCGGCAGAGAAATCAGTGTCGCGAACCAGAATCAAACGACGGAAAGTTCGAAGATTGCTGAGGCGCTTGAGATACAAATGGAAGTACAAAAAAAACTCTACGAACAAATTGAGGTGCAGAAACATTTACAGTTTCGAATTGAAGCGCAAGGAAAGTACTTACAATCGGTACTAATGAAGGCGCAAGAAGCACTTGCAGGATACGGTTCTTCATCTTCGTCCGCGTCTGGTGTAGAACATGCTAAAGCTGAACTTTCTCAGTTATTATCAACAATCAACAATGCATGTCCTAGTTCTCCGATTTCAGAACTAACAGAAACACGAGGTTTGAGTTTGAACATTACGGAGAGGAAACAAAATCGAGGAACTATGTGTTCTTTATCGAGTTCTCTAACATCATCTGAAAGCTCGGAGAGAAAAGAGGAAAAACAAACCGTAAACGAGGCAGAGAACACTCCGAATTACAATAGTGTTTCAGTTGAATTGCCATTAATGGATATCGGTACTAATGATGGAGCTAGTGCGAGAAAAAGACGCGCTGTTACTGATTTTGATTGTGGCTGTGTTGATCAACCAGATGGAAAATTTTATGGCAAAAAATTGAAGGAAAAATCTGAGGTGTCACAAATGCTTGACTTGAACAGCAAGTATGAGAGGGAGATTGAGTCAAGTTCATTAGAAATAGATTTAAATTGCAGTTCAAGTTTTTAG 999 0.3974 MDQQNQTMRLVLSTDAKPRLKWTHELHQRFTDAIHQLGGAEKATPKSLMRAMAIPGLTLYHLKSHLQKYRLGKNQLIETCSDDKQDYIEIQSSDSQCGREISVANQNQTTESSKIAEALEIQMEVQKKLYEQIEVQKHLQFRIEAQGKYLQSVLMKAQEALAGYGSSSSSASGVEHAKAELSQLLSTINNACPSSPISELTETRGLSLNITERKQNRGTMCSLSSSLTSSESSERKEEKQTVNEAENTPNYNSVSVELPLMDIGTNDGASARKRRAVTDFDCGCVDQPDGKFYGKKLKEKSEVSQMLDLNSKYEREIESSSLEIDLNCSSSF* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3699 332 Coils Coil 116 136 - -
Psa7g3699 332 Pfam Myb-like DNA-binding domain 19 70 IPR001005 -
Psa7g3699 332 SUPERFAMILY Homeodomain-like 16 73 IPR009057 -
Psa7g3699 332 Gene3D - 16 75 - -
Psa7g3699 332 Pfam MYB-CC type transfactor, LHEQLE motif 114 159 IPR025756 -
Psa7g3699 332 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 3 332 - -
Psa7g3699 332 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 3 332 IPR044848 GO:0003700
Psa7g3699 332 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 17 72 IPR006447 GO:0003677
Psa7g3699 332 MobiDBLite consensus disorder prediction 217 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3699 Psa-Chr7 312302312 312304308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3699 1 288 G2-like Transcription Factor Family AT1G69580 48.667 4.65e-78 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Psa7g3699 Myb_CC_LHEQLE 1.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3699 - - gmx:100805252 404.06