Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3697 ATGAAGTTGGGATGGGACCGTAAAAGAAAATTGAATAGGCGACTCATAGCATGGAAGAGTGATGATGATCCAACACCAGGAGACTTTACTTGGGGCGTGGTATTGAATCAGTACCCTGATATCTATATGATGAGGGGAGAAAAAAAGCTCTACAGACTTGGACCGTGGAACGGCTTGCGTTTTAGTGGTAGGCCAGAGATGAAGCCTAATCGTGTTTTCAGTTACAATTTTGTCTACAATAACGAAGAGGTTTATTACTCGTGGAACAATAGAGATAGCTCTCTAATATCAAAAGTGGTACTTAACCAAACCAACAACGAACGTCCTCGCTATACATGGTCAAATCTCGACAAGTCATGGATGCTTCAGTCAAGAATGCCAGGTGACTATTGTGACCGTTATGGTCTATGTGGAAAGAACGGATATTGCAGCATTACTAATTCACCAGTATGTGAATGTTTACAAGGGTTTCAGCCTAATTTTCCTGAAAAATGGAACTCAATGGACTGGTCCGAAGGGTGTGTCAGAAACCCTCCATTGAACTGCATCAGTGATGGATTTGTCTCAAAGGCTGGCTTGAAAGTTCCGGATACTGTAAATACTACCTTGGACAAGAGTATTGGTCTAGAACAATGTAAAGACAGATGCTTGAAAAGTTGTTCCTGCATGGCTTATACAAATACAAATATAAGTGGAGCAGGAAGTGGCTGTGTTATGTGGTTTGGTGATTTATTTGATATCAAACTTTTTCCAGTAGGTGGACAAGTTCTATATATCAGAATGCCTGCAGAATTAGTCAACAATAATACTGAGGATGAGCACAGGAGGAACCTTACAAAAATAGTTGTAATTAGTGTTTCTGCAGCTTTGGGAATGTTTTTACTTGCTATTTACTTTTCCTACCGATTTAGGAAGAGCATTGCTGGGAAGTCAATGACAGAAGGTGACTATGAAAGATATATGGACGATCACGATTTTCCCTTGCTTAGTTTGTCGACAATTATTATTGCCACCGACAACTTCTCAGAGAAGAACAAAATTGGAGAAGGGGGTTTTGGACCTGTTTATATGGGAAAATTAGGAAGTGGGCTAGAAATTGCTGTAAAGAGACTTTCACAGAGCTCAAAACAAGGGATGACAGAGTTCATTAATGAAGTAAAACTTATTGCAAATGTTCAGCATCGAAATCTTGTAAAACTTATCGGCTGTTGCATTCAGAAACACGAAAAATTGCTAGTTTATGAATACATGGCTAATGGTAGCCTAGACTACCTCATCTTTGATCGTACCAAAAGTCAACTGCTAGATTGGCCTAAGCGTTTCGACATAATATGTGGAATTGCTAGAGGGCTTATGTATCTTCATCAAGATTCTAGATTAAGGATTGTCCATAGAGATCTCAAAGCAAGTAATGTTTTACTGGACGATACTATGAATCCAAAAATATCAGATTTTGGAATGGCTAGAACTTTTGGGGGAAACCAAATTGAAGGAAACACAAATAGAATTGTGGGGACATATGGGTACATGGCACCAGAGTACGCTATTGATGGACAATTTTCTTCGAAATCTGATGTTTTCAGCTTTGGTGTTTTAATATTAGAGATTATATGTGGGAAGAAAAACCGAGTGCATAATCGTGCAAAGCAAACCCGTAACCTTGTTGCTTGTGCATGGACATTCTGGAAACACGGAGGTGCTTCACAACTAATTGACTCAAACATAGAGAATTCATGCATTGTGTCAGAAGTATCGCGTTGCATCCACGTAGGGCTCTTATGCGTGCAACAATACCCGGAAGATAGGCCTACAATGGCTGATGTGATTCTAATGCTAGGGAGTGAAATGGCATTGGATGATCCTAAGGAGCCAAGTTTTATCACAAGGAAGGAATGTGTTGAAGCAAATTCAAGCTCAAGTGGGAAGGATATAAGTTCAAACTATGAAATGACCATAACTACTTTAAGTGTTCGGTGA 1977 0.395 MKLGWDRKRKLNRRLIAWKSDDDPTPGDFTWGVVLNQYPDIYMMRGEKKLYRLGPWNGLRFSGRPEMKPNRVFSYNFVYNNEEVYYSWNNRDSSLISKVVLNQTNNERPRYTWSNLDKSWMLQSRMPGDYCDRYGLCGKNGYCSITNSPVCECLQGFQPNFPEKWNSMDWSEGCVRNPPLNCISDGFVSKAGLKVPDTVNTTLDKSIGLEQCKDRCLKSCSCMAYTNTNISGAGSGCVMWFGDLFDIKLFPVGGQVLYIRMPAELVNNNTEDEHRRNLTKIVVISVSAALGMFLLAIYFSYRFRKSIAGKSMTEGDYERYMDDHDFPLLSLSTIIIATDNFSEKNKIGEGGFGPVYMGKLGSGLEIAVKRLSQSSKQGMTEFINEVKLIANVQHRNLVKLIGCCIQKHEKLLVYEYMANGSLDYLIFDRTKSQLLDWPKRFDIICGIARGLMYLHQDSRLRIVHRDLKASNVLLDDTMNPKISDFGMARTFGGNQIEGNTNRIVGTYGYMAPEYAIDGQFSSKSDVFSFGVLILEIICGKKNRVHNRAKQTRNLVACAWTFWKHGGASQLIDSNIENSCIVSEVSRCIHVGLLCVQQYPEDRPTMADVILMLGSEMALDDPKEPSFITRKECVEANSSSSGKDISSNYEMTITTLSVR* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3697 658 Pfam Protein tyrosine and serine/threonine kinase 344 609 IPR001245 GO:0004672|GO:0006468
Psa7g3697 658 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 656 - -
Psa7g3697 658 Gene3D Phosphorylase Kinase; domain 1 306 416 - -
Psa7g3697 658 CDD STKc_IRAK 347 612 - -
Psa7g3697 658 Pfam S-locus glycoprotein domain 51 160 IPR000858 GO:0048544
Psa7g3697 658 Pfam PAN-like domain 184 247 IPR003609 -
Psa7g3697 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Psa7g3697 658 Gene3D Transferase(Phosphotransferase) domain 1 417 626 - -
Psa7g3697 658 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 656 - -
Psa7g3697 658 SMART serkin_6 341 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g3697 658 CDD PAN_AP_plant 178 262 - -
Psa7g3697 658 SMART ntp_6 182 261 IPR003609 -
Psa7g3697 658 ProSiteProfiles Protein kinase domain profile. 341 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g3697 658 ProSiteProfiles PAN/Apple domain profile. 182 263 IPR003609 -
Psa7g3697 658 ProSiteProfiles EGF-like domain profile. 127 163 IPR000742 -
Psa7g3697 658 SUPERFAMILY Protein kinase-like (PK-like) 324 612 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3697 Psa-Chr7 312266378 312270948 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3697 329 645 Receptor kinase-like Gene Family AT4G23150 54.348 1.39e-116 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa7g3697 PK_Tyr_Ser-Thr 5.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3697 - - mtr:MTR_4g081750 1080.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g3697 7 312266378 312270948 Psa7g3697 7 312266378 312270948 ECH