Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3692 ATGCTAGAAACTTCACCATATTGTGATCACACCGCAAAACCAGTCTCAACAAAGGTTTGTTCAAAATCTGTTAAAATGCTGGTACAATTTGAAACGCCGGCGGGTTTCGCTCTTTTCAAAGTTCTCAATGAAGGAAAGCTTTCTGAAGTTCGGGATTTATCTCTGGATTTTTCCACTGTTGATGCTGCAAGAAAGGTGGTCAAGCTGAAAGCGTTTTCTAAGTTTGAGAATAACAGCAGTGGGCTCATTGATGATTCACATGATATTAAGACCAGCAATAACACCAACATCCTTGGTAACTTGACACTGAGAATCATTAAAGTAAGCAAAAGAACACAAGAGGTACAGACCCAAGACATGGCGAAACTTGTCGGTATTCGGCTGAAGCTAATTTCAGTTCCGGATAATGCTAATATGAAGAACTGTTGGTTTTTCGACAACAATTTTAACGGTATGTCGGATGAGATTCTTGGGGAAGTTGAGATCCTAGTCTTCATGTTTTTCACATTGATGCTTAGAAGTTGGCATCAGCCCGGTAGTGATGGTTCCATGCCAAGACACAGTGGAACTACTGATGTTCATGATAAAAATGTAACCCAACTTTCTTCATCCACTTCCAAGACTTTAGTTGATGATCAAGAGAAGGAACGACTTCATCATCATCAGCAGCAGACGGAACGATTTCAACAACAGCAAGATATTCACCATCAACAACTACTTCACCAACAATCAAATGTATCTTTTAATTTATACAATACCAAAGCTGCAAGAATTGAAGACCAGTCGAGGTTTTGCTCAGATCAGATTCAAAAACTTGAGGACAACAAACTTCAAAGTTCTGGCTGTTTGGAGAATACACAAAGAAGGTTGTCGGATATTAGACCATCATCGCAGCAGGTTAGGGATTTAGTGGTGGAATTGCAAGCTAGAATTACTAGTAGTCGGGTGACTCGTATGGAGTTACAAACCGAACTTGAGAAAGAAATGTTTGCCCAAAAAACAGTAGAGGAAGATCTGGAGAAAATTATGATTGAGAAAGCCAGGACAGAAATTAGGAAGAAACTCGAAGAAATGGAGTTGTCATCCGAAGCTGCGGCTCTAAAAGAGAAAGAAAAGGTGCAACTTGATGTTTGTCAAGTCAAAAGACAGACATGTAGGAAAGTACCTCTGAATGTTTCTGGCATTCCATTTGAACACGGAAAAGCCAATCCGATCTCAATAACTGTCCCGGATTCTGACTTTCACGACTTCGACAAAGATAGGACAGAGGAATGTTTCCAGCCAAAGCAAATATGGGCCTTATATGATGAGGAAGACGGAATGCCGCGATTGTATTGTCTGATTCCGCCGAGAAAGCAGTCCCAAGGTGTTGTTGATGCAGCAAGGAAAGCTAACAGTGCCAAAACATGGAAGGAAGTTTTCTTTGCATGCGTTGATGAAGAGGAGTTCCGTTTGGTCCAGATATGCGGGCTGAACATTATCATTCAGGTGGATGACTTGGAAGAGGTAAGTGAATATTACCAAAACAGTTTGCTTCAACGAATTAATATCCCTCATGGAGAGTGGCCTAGGATTAGAACGGGCACATATGGGAATATTCACCGAGTTGGGAGTTCTGTATGTTGGATACCATCCGGAGACACTTATGGAGCATATCAAACTATTTGTGTTATCTCCAAAGTCGCTAATGTGGAGTTGTGTTACAAGGCTGTTCACTTCTATTTGCAAGAGCATCCTGATCTTATCAATGATGTTCTGAATGTCCTTGCACTTCGGGTTGACCATGCACGCGTTGTTGACATCATGCGAAAGGCCGGTCACCTCCGTCGGGTCAAACCATACATGGTTGCAGTTAAGAGCAATAATGTGTCAGCTGTTAATGAAGCACTCAAATTTTCTTCCCATAATTCCAATTTTTGCCTCAACAGTGGGTGCAAAGATTCTCGAAGAGAAAGTCTCTCCGAGTATTTGGGGGAAGCAGGGGTCTCCCCTACAGGGTTGCGAGAACTAGAGCCAAGTAACATGTCATCAGCAGGTTTTTTATGCTCAAATAGAAGTAAGCATTCTTCCATGAGCTTGAAAAACAATCTAGTCTGGGCAACGTTTTGCTGCCATGCCTTGACCAGTGATGCATCATCAAGATTTCGAACTATTTCGAGAACTACAATGGAAACTTCACGCTTCTCAACAGAATTCAGGCTTTTGAAGATCATAACAAAAAAGGCCAAACTTCTCAAGCTTTTGGTAAGTCAATTGGAACCTCTCACAGAGCAGCAGTTGATGGGTATTACCAACTTGCAACAATCTTCCCAACAAGCAGAAGACGCGTTGTCTCGAAGCACGACCGCATTTACGAAGGCCAGAGTTGCTGCTGCTGTCGGCGTTTCTTTCAATGCCGGTGGTTGGTGTTATTGCCTTACAGCTCCTGATGTTATTCCGTTTACCATTGCTACATGTTCAAGTGAGTTACAGTGGTGA 2478 0.4209 MLETSPYCDHTAKPVSTKVCSKSVKMLVQFETPAGFALFKVLNEGKLSEVRDLSLDFSTVDAARKVVKLKAFSKFENNSSGLIDDSHDIKTSNNTNILGNLTLRIIKVSKRTQEVQTQDMAKLVGIRLKLISVPDNANMKNCWFFDNNFNGMSDEILGEVEILVFMFFTLMLRSWHQPGSDGSMPRHSGTTDVHDKNVTQLSSSTSKTLVDDQEKERLHHHQQQTERFQQQQDIHHQQLLHQQSNVSFNLYNTKAARIEDQSRFCSDQIQKLEDNKLQSSGCLENTQRRLSDIRPSSQQVRDLVVELQARITSSRVTRMELQTELEKEMFAQKTVEEDLEKIMIEKARTEIRKKLEEMELSSEAAALKEKEKVQLDVCQVKRQTCRKVPLNVSGIPFEHGKANPISITVPDSDFHDFDKDRTEECFQPKQIWALYDEEDGMPRLYCLIPPRKQSQGVVDAARKANSAKTWKEVFFACVDEEEFRLVQICGLNIIIQVDDLEEVSEYYQNSLLQRINIPHGEWPRIRTGTYGNIHRVGSSVCWIPSGDTYGAYQTICVISKVANVELCYKAVHFYLQEHPDLINDVLNVLALRVDHARVVDIMRKAGHLRRVKPYMVAVKSNNVSAVNEALKFSSHNSNFCLNSGCKDSRRESLSEYLGEAGVSPTGLRELEPSNMSSAGFLCSNRSKHSSMSLKNNLVWATFCCHALTSDASSRFRTISRTTMETSRFSTEFRLLKIITKKAKLLKLLVSQLEPLTEQQLMGITNLQQSSQQAEDALSRSTTAFTKARVAAAVGVSFNAGGWCYCLTAPDVIPFTIATCSSELQW* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3692 825 PANTHER CLATHRIN HEAVY CHAIN RELATED 452 510 - -
Psa7g3692 825 PANTHER CLATHRIN HEAVY CHAIN RELATED 548 631 - -
Psa7g3692 825 Gene3D Tetratricopeptide repeat domain 542 634 IPR011990 GO:0005515
Psa7g3692 825 Gene3D Tetratricopeptide repeat domain 430 513 IPR011990 GO:0005515
Psa7g3692 825 PANTHER CLATHRIN HEAVY CHAIN 1-RELATED 548 631 - -
Psa7g3692 825 PANTHER CLATHRIN HEAVY CHAIN 1-RELATED 452 510 - -
Psa7g3692 825 MobiDBLite consensus disorder prediction 194 208 - -
Psa7g3692 825 Pfam NOP5NT (NUC127) domain 29 82 IPR012974 -
Psa7g3692 825 Pfam NAD-specific glutamate dehydrogenase 77 124 IPR019651 -
Psa7g3692 825 MobiDBLite consensus disorder prediction 209 226 - -
Psa7g3692 825 Coils Coil 255 275 - -
Psa7g3692 825 MobiDBLite consensus disorder prediction 181 231 - -
Psa7g3692 825 SUPERFAMILY ARM repeat 451 630 IPR016024 -
Psa7g3692 825 Coils Coil 344 364 - -
Psa7g3692 825 Pfam Domain of unknown function (DUF3444) 406 448 IPR024593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3692 Psa-Chr7 311840040 311844129 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3692 740 787 bZIP Transcription Factor Family AT5G06950 60.417 9.99e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3692 K04646 - sspl:121744202 211.46