Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3688 ATCTTCGGCAAAACCCTGACTGGGAAAACCATCACCCTCGAGGTCGAGTCTTCCGACACCATCGACAATGTCAAAGCAAAGATCCAAGATAAGGAAGGAATCCCACCGGACCAACAGCGACTGATCTTCGCCGGCAAACAGCTAGAAGACGGCCACACTCTTGCTGACTACAACATTCAGAAGGAATCCACACTCCACCTTGTTCTCCGTCTCTGTGGTGGAGCCGAGAAGCGTAAGAAGAAGACCTACACCAAGCCGAAGAAGATTAAGCACAAGCATAGGAAGGTGAAGCTAGCCGTTCTTCAGTTTTACAAGGTCGCTCATTCTGGGGAAATTTTGAAGGTACGATGA 351 0.4929 IFGKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGHTLADYNIQKESTLHLVLRLCGGAEKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVAHSGEILKVR* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3688 116 PANTHER UBIQUITIN-40S RIBOSOMAL PROTEIN S27A-1 1 116 - -
Psa7g3688 116 ProSitePatterns Ubiquitin domain signature. 25 50 IPR019954 -
Psa7g3688 116 Gene3D - 1 78 - -
Psa7g3688 116 PANTHER UBIQUITIN 1 116 - -
Psa7g3688 116 PRINTS Ubiquitin signature 9 29 IPR019956 -
Psa7g3688 116 PRINTS Ubiquitin signature 30 50 IPR019956 -
Psa7g3688 116 PRINTS Ubiquitin signature 51 72 IPR019956 -
Psa7g3688 116 Pfam Ubiquitin family 4 71 IPR000626 GO:0005515
Psa7g3688 116 Gene3D - 79 116 IPR038582 -
Psa7g3688 116 SMART ubq_7 1 70 IPR000626 GO:0005515
Psa7g3688 116 CDD Ubl_ubiquitin 1 74 - -
Psa7g3688 116 ProSiteProfiles Ubiquitin domain profile. 1 74 IPR000626 GO:0005515
Psa7g3688 116 SUPERFAMILY Ubiquitin-like 3 91 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3688 Psa-Chr7 311142876 311143226 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3688 1 116 Cytoplasmic Ribosomal Protein Gene Family AT1G23410 87.931 2.69e-56 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3688 K02977 - fve:101295174 178.718