Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3684 ATGGCTCTGACGATGAGAGCTGCAGCGGCGGCGGCGCCCCGCGGTTTGCGCCGCTTTTTCTGCTCGAACCCAATCCCGTCTTCTCCCACTTTCCCTTTCGCTTCAACGCCACCTTCCGGAGCTACTTCCGCTCGACAGATGGCGGATCCTAACACCAACCTCTTCGTGTCTGGGCTTAGCAAACGTACTACAACGGAGAGACTGCGAGAAGAGTTTCAAAAGTTTGGCGAAGTGGTTCATGCAAGGGTGGTAACTGATCGAGTCTCAGGTTACTCCAAGGGGTTTGGTTTTGTGCAATATGCCACTTTAGAAGATGCTGCTAAAGGCATTGAAGGCATGGATGGCAAGTTTTTGGATGGCTGGGTTATATTTGCAGAGTATGCAAGACCAAGACCCCCACCTGGAGAAGCTGTAAATAATATGACTAAACAGTATGGCCGACCTTATTAG 450 0.5089 MALTMRAAAAAAPRGLRRFFCSNPIPSSPTFPFASTPPSGATSARQMADPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATLEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGEAVNNMTKQYGRPY* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3684 149 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 3, MITOCHONDRIAL-LIKE 1 147 - -
Psa7g3684 149 SUPERFAMILY RNA-binding domain, RBD 35 147 IPR035979 GO:0003676
Psa7g3684 149 PANTHER TRANSFORMER-2-RELATED 1 147 - -
Psa7g3684 149 SMART rrm1_1 53 126 IPR000504 GO:0003723
Psa7g3684 149 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 54 120 IPR000504 GO:0003723
Psa7g3684 149 Gene3D - 32 139 IPR012677 -
Psa7g3684 149 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 52 130 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3684 Psa-Chr7 311035303 311038923 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3684 42 132 Eukaryotic Initiation Factors Gene Family AT3G11400 36.264 2.08e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3684 - - gmx:100784609 221.476