Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3669 ATGGCAACAGCACCAGAAGAAGAGTACTTGCAACAGCTCCGATCCAGAGCAACAGAGCTTTTCATCAGAGAAGAATGGAACCATTCAATCGAAGCTTATTCCCAATTCATCACCCTCTGCACCCACCATCTCTCTCTTCCTCAATCTCATTCCAGTTCACTCAAGCTTCGCAAATCCCTCTGCATAGCCCTATGCAACCGAGCAGAAGCGAAATCAAGATTGCGCGAATTCAACTCCGCCTTGCAAGATTGTGATGACGCTTTGCAAGTTGATGGGTCTCATTTCAAAACCCTAGTTTGCAAAGGTAAGATTTTGCTTTCGCTTAGTAGGTACTCTACGGCTCTTCATTGCTTTAAAATGGCTCTGCTTGATCCTCAAGCGAATGGGAATGATGATTTTCTTGGGTTTTGGCAAAAATGTAGAAAGTTTGAATCTTTATCAAGAACTGGGTTTCTTGATCTTTCTGATTGGGTTTCGAATGGGTTTCCGGGTAAGGCTCCTGAGCTTGCTGAATATATTGGTGATGTTCAGATTAGAAAATCTGAAATTAGTGGGCGTGGGGTTTTCGTTACTAAGGATATTGACGCAGGGTCTTTGATCTTGATTACGAAGGCGATTGCGATGGAGAGGAGTTTATTGGCAGGTAAAGATTTGTGTGAAGATACGCAGTTAGTTATGTGGAAGAATTTCGTTGATAAAGTTATAGAGTTGGTTAGAAAATGTCATAAAACTAGGGATTTGATTGAGAAATTGTCAATTGGGGGAAAGGAGGACGAACTCGATGTGCCTGATGTAGATCTCTTTAGGCCTGAGAGTATTGGTGAAATGAATTCACGCGAGGAAATTGATATGGTTAAGTTATTGGCTATATTGGATGTTAATTCTCTTACCGAGGAGGCGGTTTCAGCCAATGTTTTGAGGAAGAACAATGATTGCTATGGTGTTGGGCTATGGTTGCTTCCTTCATTCATCAATCACTCGTGTTCGCCTAATGTGAGGCGTTTGCATGTCGGGGATTATTTAATAGTTCATGCTTCGAGAGATTTGAAAGCGGATGAAGAGCTAACTTTTGCTTATTATGATCCACTTTGTCCCTTGAGCAAGAGAAGAGATATGTCTGTGACATGGGGGATTCAATGCAGGTGTAAGAGGTGTAAGTTTGAGGTGGATATCTTGTACTACAAGAAAGAGTTGAAGGAGATTGAGATTGGTATTGAAAAAGGGATGGATGTTGGTAGTTTGGTCTATAAACTCGAGGAGCAAATGAAGAGATGGAAGATAAGAGCGAAAGAGAAGGGATACATGAGGGCTTCGTTTTGGTCGTTGTATTCAGAGACGTATGGTTCGGAGAAGTGTATGAAAAAATGGGGAAGGAGAATTCCGATATTGGATGCAGTGGTCGATAGCGTCACAGATGCAGTGGGAAGTGATCACAGGGTGCTTAAGATTCTGAATGAGGAGATGAAGAAAAAAGCTAGTGGTAGTAGTGGTGATGGAAATTTGGAGATGGAGAAAGTTTTCAGGTTAGCAAGAGAAGTATATGGAAAGGTAATGAAAAAGCATGCAATGAGGAAATTGCTTGAGCTTTGCAATGCTGATTGA 1602 0.4164 MATAPEEEYLQQLRSRATELFIREEWNHSIEAYSQFITLCTHHLSLPQSHSSSLKLRKSLCIALCNRAEAKSRLREFNSALQDCDDALQVDGSHFKTLVCKGKILLSLSRYSTALHCFKMALLDPQANGNDDFLGFWQKCRKFESLSRTGFLDLSDWVSNGFPGKAPELAEYIGDVQIRKSEISGRGVFVTKDIDAGSLILITKAIAMERSLLAGKDLCEDTQLVMWKNFVDKVIELVRKCHKTRDLIEKLSIGGKEDELDVPDVDLFRPESIGEMNSREEIDMVKLLAILDVNSLTEEAVSANVLRKNNDCYGVGLWLLPSFINHSCSPNVRRLHVGDYLIVHASRDLKADEELTFAYYDPLCPLSKRRDMSVTWGIQCRCKRCKFEVDILYYKKELKEIEIGIEKGMDVGSLVYKLEEQMKRWKIRAKEKGYMRASFWSLYSETYGSEKCMKKWGRRIPILDAVVDSVTDAVGSDHRVLKILNEEMKKKASGSSGDGNLEMEKVFRLAREVYGKVMKKHAMRKLLELCNAD* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3669 533 Gene3D SET domain 274 389 IPR046341 -
Psa7g3669 533 SUPERFAMILY TPR-like 8 122 IPR011990 GO:0005515
Psa7g3669 533 Gene3D Tetratricopeptide repeat domain 2 137 IPR011990 GO:0005515
Psa7g3669 533 PANTHER TPR DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_5G12710) 6 519 - -
Psa7g3669 533 SMART tpr_5 95 127 IPR019734 GO:0005515
Psa7g3669 533 SMART tpr_5 10 43 IPR019734 GO:0005515
Psa7g3669 533 SMART tpr_5 61 94 IPR019734 GO:0005515
Psa7g3669 533 SMART set_7 174 366 IPR001214 GO:0005515
Psa7g3669 533 Pfam SET domain 185 359 IPR001214 GO:0005515
Psa7g3669 533 CDD SET_SMYD 288 385 - -
Psa7g3669 533 ProSiteProfiles SET domain profile. 174 360 IPR001214 GO:0005515
Psa7g3669 533 SUPERFAMILY SET domain 175 386 IPR046341 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Psa7g3669 SET 3.8e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3669 - - mtr:MTR_4g082140 826.624