Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3663 ATGCCGAGAACACCTTCATATGACAAAAGTGGATTGAGGAAAGGGATTTGGACTGTTGAGGAAGATATGAAATTAATTGCTTATATAACTAGATATGGTCTTTCGAGATGTGGAAAAAGTTGTAGATTGAGGTGGATGAATTATTTAAGGCCTGATATCAAAAGAGGAAACTTCACTCAACAAGAAGAGGAATTGATTATCAGAATGCATAACGAACTGGGCAATAGATGGTCAGTCATTGCGGCTGAGTTACCTGGAAGAACTGATAACGAAGTGAAGAACCATTGGCATACTTTACATAAGAGGAGAGTTCAACAGATTAACACAAACACAGTCTCAAATGAAGAAACTATGGCCACCAAATCTCCCACTAGTTCCCAGATGTCAGACATCACTAGCCAACTACCTTCATTTTTATCATCTAGTGAATTTTCTTCCATAGCCGAAGATGATTTTGGTTTTCTAGATTCATATATAGAATCAATGGATGAAAGTTTTTGA 501 0.3693 MPRTPSYDKSGLRKGIWTVEEDMKLIAYITRYGLSRCGKSCRLRWMNYLRPDIKRGNFTQQEEELIIRMHNELGNRWSVIAAELPGRTDNEVKNHWHTLHKRRVQQINTNTVSNEETMATKSPTSSQMSDITSQLPSFLSSSEFSSIAEDDFGFLDSYIESMDESF* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3663 166 CDD SANT 57 99 IPR001005 -
Psa7g3663 166 ProSiteProfiles Myb-like domain profile. 50 100 IPR001005 -
Psa7g3663 166 SMART sant 13 51 IPR001005 -
Psa7g3663 166 SMART sant 54 102 IPR001005 -
Psa7g3663 166 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 50 104 IPR017930 -
Psa7g3663 166 SUPERFAMILY Homeodomain-like 11 96 IPR009057 -
Psa7g3663 166 Pfam Myb-like DNA-binding domain 55 99 IPR001005 -
Psa7g3663 166 PANTHER MYB-RELATED TRANSCRIPTION FACTOR 1 129 - -
Psa7g3663 166 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 129 - -
Psa7g3663 166 Gene3D - 56 131 - -
Psa7g3663 166 ProSiteProfiles Myb-like domain profile. 9 49 IPR001005 -
Psa7g3663 166 Gene3D - 16 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3663 Psa-Chr7 309510802 309511421 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3663 1 147 MYB Transcription Factor Family AT5G16770 46.541 1.65e-47 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Psa7g3663 Myb_DNA-binding 7.8e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3663 K09422 - gmx:778087 217.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g3663 7 309510802 309511421 Psa7g3663 7 309510802 309511421 ECH