Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3662 ATGGTGAGAACACCTTCTTATGACAAGAGTGGATTGAAGAAAGGGATTTGGACGGTTGAGGAAGATCTGAAATTAATTGCTTATGTAACTAAATATGGTTGTTGGAATTGGTGTCAACTCCCTAAGTTTGCAGGTCTTTCGAGATGTGAAAAAAGTTGTAGATTGAGGTGGATGAATTATTTAAGGCCTAATATCAAAAGAGGGAACTTCACTCAACAAGAAGAGGAATTGATTATTCGAATGCATAACCAGCTGGGCAATAGATGGTCAGTCATTGCGGCTGAGTTACCTGGAAGAACTGATAACGAAGTGAAGAACCATTGGCATACTTTACATAAGAGGAGAGTTCAACAGATGAACACAGTCTCAAATGAAGAAACTATAGCCACCAGATCTCCAACTAGTTCCCAGATGTCAGACATCACTAGCCAATTACCTTCATTTTTATCATCTAGTGAATTCTCTTCCATAGCTGAAGATGATTTTGTTTTTGGCGGCGCATATGAAGTTGCGGGTGTTGCGGATGCGGCTAATACAGTTGCTGCGATGCGAATTGCGGTCATTGCGTGCGGTGATGATGCGGTCAGATGTGGCGGAGATGCAGTCCGGTGCGGCGGCGATGCAGTTTTGTTGCGGCGATTCCATGTGATTTCATTTCACACCGCAATTACGGCCAAGTACAAAAGAGCAATTAAAGAAGGAAGCTCAACCTTTAAAGAATACTCAGTTGATAGTTTGCAAGTGCAGAAAGTCATTATTGCTTTAAGTTACACAAAGAAGGTAGAAGAGAGAAGGAAATGCAACTAA 807 0.4164 MVRTPSYDKSGLKKGIWTVEEDLKLIAYVTKYGCWNWCQLPKFAGLSRCEKSCRLRWMNYLRPNIKRGNFTQQEEELIIRMHNQLGNRWSVIAAELPGRTDNEVKNHWHTLHKRRVQQMNTVSNEETIATRSPTSSQMSDITSQLPSFLSSSEFSSIAEDDFVFGGAYEVAGVADAANTVAAMRIAVIACGDDAVRCGGDAVRCGGDAVLLRRFHVISFHTAITAKYKRAIKEGSSTFKEYSVDSLQVQKVIIALSYTKKVEERRKCN* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3662 268 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Psa7g3662 268 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Psa7g3662 268 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Psa7g3662 268 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Psa7g3662 268 PANTHER MYB-RELATED TRANSCRIPTION FACTOR 1 134 - -
Psa7g3662 268 CDD SANT 17 61 IPR001005 -
Psa7g3662 268 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Psa7g3662 268 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Psa7g3662 268 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 134 - -
Psa7g3662 268 Gene3D - 68 140 - -
Psa7g3662 268 CDD SANT 69 111 IPR001005 -
Psa7g3662 268 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Psa7g3662 268 SMART sant 66 114 IPR001005 -
Psa7g3662 268 SMART sant 13 63 IPR001005 -
Psa7g3662 268 Gene3D - 6 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3662 Psa-Chr7 309469158 309472462 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3662 1 157 MYB Transcription Factor Family AT5G16770 50.318 2.96e-51 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Psa7g3662 Myb_DNA-binding 2.6e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3662 K09422 - gmx:100777107 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g3662 7 309469158 309472462 Psa7g3662 7 309469158 309472462 ECH
Psa5g6161 5 527465282 527466528 Psa7g3662 7 309469158 309472462 PCT