Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3645 ATGTCTCTAAGCAACCTATATCCACAAAGTAACTTCTTCCAGGAGGCTCAGATGAATGATGCTTCTGAGGTACTGGCAGTAATATTTGACTGCCTTCATCGATCATTTACCTATGGTTCAGGTGTTTCTGATGCAGAATCAGCGGAAAGAAACTACACAGGGTCTTGGGATTGTGCAACTGATAGTTATATAGTACATTCACATTTTGGAATGAACATTTTTGAACGGATGAACTGCTACCATTGTGGTCTTGAGTCCAGAAATTTGAAGTATACTTCTTTCTTTCACAATATAAATTCCAATGCCCTTAGGACAATGAAGGCTATGTTTCCTGAGTGCTCCCTTGACAAGCTTTTGAATCTTATGGAGAGAAACCATCAACTTGTATATGATCTAGAGGCTGAGGGTTGTGGCAAGCTCAACCATGTCCGTCACTTTCTTTCAGCTCCGCCCCGTGTTTTTATGACAGTTCTAGGTTGGCAAAATACATGTGAGAGTGTTGATGACATAGCTGCAACTTTGGCAGCCCTGAGTACCAAAATAGATATTAGTGTCCTTTATCGTGATTTAAGTCCTAAAAGCACCCATAACTTGGTTTCAATGGTTTGCTACTATGGCCAACATTATCATTGCTTTGCTTATGGTCACAATCACGGCCAATGGATTATGTAG 672 0.4048 MSLSNLYPQSNFFQEAQMNDASEVLAVIFDCLHRSFTYGSGVSDAESAERNYTGSWDCATDSYIVHSHFGMNIFERMNCYHCGLESRNLKYTSFFHNINSNALRTMKAMFPECSLDKLLNLMERNHQLVYDLEAEGCGKLNHVRHFLSAPPRVFMTVLGWQNTCESVDDIAATLAALSTKIDISVLYRDLSPKSTHNLVSMVCYYGQHYHCFAYGHNHGQWIM* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3645 223 Pfam Ubiquitin carboxyl-terminal hydrolase 10 222 IPR001394 GO:0004843|GO:0016579
Psa7g3645 223 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1 223 IPR028889 -
Psa7g3645 223 Gene3D Cysteine proteinases 1 223 - -
Psa7g3645 223 CDD Peptidase_C19 16 223 - -
Psa7g3645 223 PANTHER INACTIVE UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 53-LIKE 2 223 - -
Psa7g3645 223 SUPERFAMILY Cysteine proteinases 7 222 IPR038765 -
Psa7g3645 223 PANTHER UBIQUITIN SPECIFIC PROTEINASE 2 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3645 Psa-Chr7 305898578 305899337 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3645 1 223 C2H2 Transcription Factor Family AT3G47890 71.749 1.72e-111 347