Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3639 ATGCCGAAGAGATGGTGGTCAAGATTAAGGAAGAAAGGCATAATACCCGACTGCACGGTCTATAATTTATTAATGAGTGCTTATGGATGTATAGGACAACTAGATAATGCATTTGGTGTTCTTGAACGCATGTTTGATACAGGAAGGGAGCATCATCATGAATATCAACAATCTTCTTTGCATTGGATTGCTTGCGAATCTCTGCAACTCGTTTCACAAATCGGAACTCACCTCGCTCTACGAACTCGTCCGAACAAGGACTTCATCGTCAAATCTCTTCGAAAAGCTGCAGATGCTTTGTCTAAGTTAGAACAGTCTCCTCAACTGGAAATAATCAAGGGGGTACAAGCTTCGAAGAAACGAGATGATGCTTTGAAGCCCCTGATTGATGCTGTAATTTATGGTGGTTTGCTTTGTCATGAGGATAAGGATGTCAAGCTTCTGGTTGCAATTTGCGTCACTGAATTACTTGGAGTGATGGCTCCTGAACCCCCTAATTTGCAGTGCGCGCCTCATATGCTTCTTGTTGTCATCCCTAGATTAATTGAAGAGTTATCGGCTGATCAGACGGTTACTGTAGCCTGTGATATTTGCGGTTCAAACCTGAAGCGCGCTCCCTTGAAACTAATGGCTAAAGTTGGATGCGGTGCAAGTCCCGGTCTCGAGGTCACAGGGGAACCCCATATCTTTTATCTGGTGCCAGAAAAAAATATGAAAAATATTAAGAACCTTTCTAAAGAGGTTGAAAAGAAAGACTGGGAGGGTGCTACCTGCTCAGTTCTAAAAGTTTATCCATTTCCGGCAACAGTTACAACATTTCAATTTGGCTTGGCTTCATTGGTGATTAATTCGATCTGGATTTTGAATCTACATCCAAGGCCGAACATTAGAAGATCGCAGTTTGCAGCAATTCTTCCACTGGTTTCTACAGTTTTAGGAAGGTCGAACTATGTTAACACTGCGAATAGGATGATCTTACTTCAGAACTTAGAGAACTTGGATGGTCTGAATTGGACCTACACAAGGAAGATAAAAAAATCAGCAAATTTGAGCTTGGAGGGTGAACTCTCATCATTAATTGGAGAAACCTTTGCAAAAACAGGTGAAAAAAAGGGCAGCAGGATCGACAAGTCTGAGGTTGTTGCCATGAAAAGGAGGGCTCTAGCGTTGAAGCGCAAGGGTAACCTGCAGAAGCTAAAGAAGAATTAA 1209 0.4218 MPKRWWSRLRKKGIIPDCTVYNLLMSAYGCIGQLDNAFGVLERMFDTGREHHHEYQQSSLHWIACESLQLVSQIGTHLALRTRPNKDFIVKSLRKAADALSKLEQSPQLEIIKGVQASKKRDDALKPLIDAVIYGGLLCHEDKDVKLLVAICVTELLGVMAPEPPNLQCAPHMLLVVIPRLIEELSADQTVTVACDICGSNLKRAPLKLMAKVGCGASPGLEVTGEPHIFYLVPEKNMKNIKNLSKEVEKKDWEGATCSVLKVYPFPATVTTFQFGLASLVINSIWILNLHPRPNIRRSQFAAILPLVSTVLGRSNYVNTANRMILLQNLENLDGLNWTYTRKIKKSANLSLEGELSSLIGETFAKTGEKKGSRIDKSEVVAMKRRALALKRKGNLQKLKKN* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3639 402 Gene3D Tetratricopeptide repeat domain 3 96 IPR011990 GO:0005515
Psa7g3639 402 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 69 165 IPR039776 GO:0007064
Psa7g3639 402 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Psa7g3639 402 Pfam Sister chromatid cohesion protein PDS5 protein 87 165 - -
Psa7g3639 402 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 17 51 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3639 Psa-Chr7 304486210 304488899 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3639 260 345 Antiporters AT3G01550 43.678 1.86e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3639 K11267 - gmx:100777822 132.88