Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3637 ATGTTTCAGTCAAACCTTTTGGAAGCTGGTCAGTTCCATCCATTAGAGATGATGCAAAACACTTCTGAAAGCGATGTTCCACGAATCCGTGAAGATGAATGTTTCGAGAGTGCCACTAAATCCTACAGTGAAAACCATGAAGGTGGTGCTGCTTCTGGCGAAGAACAGGAACCACGTCCCAAAAGAAAACGTTACCACCGCCATACTCAGCACCAGATCCAAGAAATGGAATCTTTCTTCAAGGAGTGTCCACATCCGGATGATAAACAAAGGAAGGAGCTAAGCAGAGAGTTAGGGTTAGAGCCATTGCAGGTTAAGTTTTGGTTTCAAAACAAACGAACTCAGATGAAGACACAACATGAACGTTCAGAGAATTCGCAGCTTAGGGCAGAAAATGAGAAGCTTAGGGCAGATAATATGAGGTATAGGGAAGCTCTTAGCAATGCTTCATGCCCTAATTGTGGTGGTCCTACAGCTATAGGTGAAATGTCATTTGATGAACATCATTTGAGGCTTGAAAACGCAAGGCTACGAGAAGAGATTGATAGGATTTCGGCAATTGCAGCGAAATACGTAGGAAAACCAGTGGTAAACTATTCCAACATTTCACCATCTCTTCCACCGCGCCCATTAGAAATTGGTTTTGGTAACCAACAAGGGATTGGTACCATGGACATATATGGTGGTAGTGGAGATCTTCTAAGGACATTAAGTGGACCGACCGCAGCAGACAAACCAATAATAATAGAATTAGCTGTTGCAGCCATGGAAGAACTAACTGGTATGGCACAAATGGTTGAACCTCTTTGGTTAAGTACTACACTTGATGGAGCTGCCACGGTTCTTAATGAAGACGAATATGTTAGGTCATTTCCTCGTGGAATTGGACCGAAACCTAATGGATTTAAATGCGAAGCTTCTAGAGAAACTTGTGTTGTTATCATGAATCATGTCAACCTTGTTGAGATTCTCATGGATGTGAATCAATGGTCGACAGTGTTCGCTGGTATTGTTTCAAGAGCTATGACTGTGGAAGTGTTGTCAACTGGGGTGGCAGGGAACTACAATGGTGCTTTACAAGTGATGACAGCAGAATTTCAAGTACCTTCACCTCTCGTGCCAACTCGCGAGAGTTACTTTGTAAGATATTGTAAACAACATACCGATGGGACATGGGCAGTTGTGGATGTTTCTTTGGATAATTTGCGCCCCAGTCCTTCATCCCGATGCAGAAGAAGGCCTTCTGGTTGCTTAATTCAAGAAATGCCTAATGGCTACTCCAAGGTGACATGGGTTGAGCATGTAGAAGTGGATGACAGAGGTGTTCATAATCTATACAAGCAACTTGTTAGCACCGGACACGCATTTGGCGCAAAACGCTGGGTTGCAACATTAGATCGGCAATGTGAAAGGCTCGCTAGCTCCATGGCAACAAACATTCCCACAGTAGACGTCGGCGTGATAACTAACCAAGAAGGGAGGAAGAGTATGCTGAAACTGGCGGAGAGAATGGTGATAAGCTTTTGTGGTGGAGTGAGTGCTTCAACAGCACACACATGGACAACACTATCTGGAACAGGAGCTGATGATGTGAGAGTGATGACACGTAAGAGTGTCGATGATCCTGGAAGACCTCCCGGTATTGTTCTTAGTGCTGCTACTTCTTTTTGGCTTCCGGTTCCACCGAAACAAGTCTTCGATTTCCTTCGCGACGAGAACTCGAGAAATGAGTGGGATATTCTTTCCAACGGCGGAGCAGTCCAAGAAATGGCACACATTGCTAACGGAAGAGAAACCGGAAATTGTGTCTCTCTACTAAGAGTAAATAGTGCGAATTCAAGTCAGAGCAACATGCTGATATTACAAGAGAGTGTAACAGATTCAACAGGCTCATTTGTTATCTATGCACCAGTAGATATTGTTGCTATGAATGTAGTTCTAAACGGAGGAGATCCAGATTATGTAGCACTTCTTCCATCAGGATTTGCTATACTTTCCGATGGAAATGGAAGCGATGAATCTGGAGCACAAGCTGGGGGTGGATCGCTTTTGACGGTTGCGTTTCAAATATTGGTTGATTCTGTTCCAACTGCTAAACTTTCTCTTGGATCTGTTGCTACGGTTAATAGTCTTATTGCTTGTACTGTTGAGAGAATCAAAGCTTCTTTATCTGGTGAAGCTGTTTGA 2187 0.4367 MFQSNLLEAGQFHPLEMMQNTSESDVPRIREDECFESATKSYSENHEGGAASGEEQEPRPKRKRYHRHTQHQIQEMESFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERSENSQLRAENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYSNISPSLPPRPLEIGFGNQQGIGTMDIYGGSGDLLRTLSGPTAADKPIIIELAVAAMEELTGMAQMVEPLWLSTTLDGAATVLNEDEYVRSFPRGIGPKPNGFKCEASRETCVVIMNHVNLVEILMDVNQWSTVFAGIVSRAMTVEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYFVRYCKQHTDGTWAVVDVSLDNLRPSPSSRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSTGHAFGAKRWVATLDRQCERLASSMATNIPTVDVGVITNQEGRKSMLKLAERMVISFCGGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKQVFDFLRDENSRNEWDILSNGGAVQEMAHIANGRETGNCVSLLRVNSANSSQSNMLILQESVTDSTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILSDGNGSDESGAQAGGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKASLSGEAV* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3637 728 Pfam START domain 251 471 IPR002913 GO:0008289
Psa7g3637 728 CDD homeodomain 61 120 IPR001356 GO:0003677
Psa7g3637 728 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 15 725 IPR042160 -
Psa7g3637 728 MobiDBLite consensus disorder prediction 25 40 - -
Psa7g3637 728 Coils Coil 118 145 - -
Psa7g3637 728 ProSiteProfiles START domain profile. 241 474 IPR002913 GO:0008289
Psa7g3637 728 SMART START_1 250 471 IPR002913 GO:0008289
Psa7g3637 728 CDD START_ArGLABRA2_like 245 470 - -
Psa7g3637 728 SUPERFAMILY Homeodomain-like 53 119 IPR009057 -
Psa7g3637 728 SUPERFAMILY Bet v1-like 490 720 - -
Psa7g3637 728 ProSitePatterns 'Homeobox' domain signature. 94 117 IPR017970 GO:0000981|GO:0006355
Psa7g3637 728 SMART HOX_1 60 123 IPR001356 GO:0003677
Psa7g3637 728 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 15 725 - -
Psa7g3637 728 MobiDBLite consensus disorder prediction 13 71 - -
Psa7g3637 728 ProSiteProfiles 'Homeobox' domain profile. 59 119 IPR001356 GO:0003677
Psa7g3637 728 SUPERFAMILY Bet v1-like 243 473 - -
Psa7g3637 728 Pfam Homeodomain 62 117 IPR001356 GO:0003677
Psa7g3637 728 Gene3D - 294 468 IPR023393 -
Psa7g3637 728 Gene3D - 49 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3637 Psa-Chr7 303978546 303983925 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3637 1 726 Homeobox Transcription Factor Family AT1G05230 77.520 0.0 1135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Psa7g3637 START 5e-58 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3637 K09338 - gmx:100782260 1267.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6072 5 520434252 520440512 Psa7g3637 7 303978546 303983925 PCT