Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3613 ATGGCTCCTTCTTTCACAGTAACTTCACGTTTTCATGAATCCTTCACCCGAAGTGCACTTCGCTCTTATCTCGCCGAGTTTATCTCAACCTTCTTCTATGTCCTTATTGTTGTAGGTTCTGGAATGTCCTCAAGGAAGTTGATGCCTGATGCTTCACTGAACCCAACAAGTTTGGTTGTGGGTGCTATTGCAAATGCCTTTGCTCTGTCATCAGTTTTGTACATCGCATGGGACATCTCAGGCGGACATGTGAATCCGGCTGTGACATTTGCAATGGCTGTTGGAGGCCATATTAGTGTCCCAACTGCTCTCTTTTATTGGGTTGCTCAACTTATTGCATCTGTTATTGCTTGCCTTTTCCTCAAAGTCATTGTTGTTGGAATGCATGTACCAACATATGTAATTGCAGAAGAGATGACAGGATTTGGAGCATCCATATTAGAGGGTATCCTAACATTTGTGTTAGTGTACACAATATATGCTGCAAGGGACACTAGGCGTGGTCAAGTAAGTTCAACAGGAACACTTGTAATTGGATTAATCGCAGGAGCAGGTGTGTTGGCAGCAGGACCATTCTCTGGTGGATCCATGAACCCGGCATGTGCTTTTGGCTCTGCTTCCATTGCTGGAACTTTCAGAAATCAAGCTGTCTATTGGGTTGGACCCTTGGTTGGTGCTGCTGTTGCTGGTCTTCTTTATGACAATGTGTTGTTCCCTTCTCAGAATTCAGATTCAGTTAGAGGAGGAGTTTCAAATGTGTAA 762 0.4409 MAPSFTVTSRFHESFTRSALRSYLAEFISTFFYVLIVVGSGMSSRKLMPDASLNPTSLVVGAIANAFALSSVLYIAWDISGGHVNPAVTFAMAVGGHISVPTALFYWVAQLIASVIACLFLKVIVVGMHVPTYVIAEEMTGFGASILEGILTFVLVYTIYAARDTRRGQVSSTGTLVIGLIAGAGVLAAGPFSGGSMNPACAFGSASIAGTFRNQAVYWVGPLVGAAVAGLLYDNVLFPSQNSDSVRGGVSNV* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3613 253 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Psa7g3613 253 PANTHER AQUAPORIN-8 6 251 IPR034294 -
Psa7g3613 253 SUPERFAMILY Aquaporin-like 11 242 IPR023271 -
Psa7g3613 253 Gene3D Glycerol uptake facilitator protein. 5 248 IPR023271 -
Psa7g3613 253 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g3613 253 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g3613 253 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g3613 253 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g3613 253 PRINTS Major intrinsic protein family signature 179 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g3613 253 PRINTS Major intrinsic protein family signature 216 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g3613 253 PANTHER AQUAPORIN TIP5-1-RELATED 6 251 - -
Psa7g3613 253 Pfam Major intrinsic protein 17 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3613 Psa-Chr7 299716873 299718567 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3613 1 243 Major Intrinsic Protein MIP AT3G47440 63.374 1.89e-107 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3613 K09873 - gmx:100801448 412.92