Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3580 ATGAGTTCGGGAAGCAGCAACAAAGATAAAGAAAAGGCGAGAGTGAGTCGCACCTCACTCATACTATGGCACGCTCACCAAAACGACGCCGCTGCGGTTCGGAAGCTTCTTCAAGAAGATCCTTCGCTTGTCAATGCTACCGATTACGATAACCGCACTCCGCTGCATGTTGCTTCTCTCCATGGATGGATCGAGGTTGCTAAATGCTTGATTGAATTCGGCGCTGATGTCAACGCTCAAGATCGTTGGAAGAACACCCCTTTGGCTGATGCAGAAGGATCTAAAAGGAGTAATATAATCGAGCTTTTGAAATCGCATGGAGGATTGTCTTATGGTCAAACTGGAAGCCATTTTGAACCTAGGGCGGTTCCGCCACCGTTGCCTAACAAGTGTGATTGGGAAGTTGATCCTTCTGAGCTTGACTTCTCAAGTTCTGCGCGTATTGGAAAGGGATCTTTCGGTGAAATTTTGAAAGCCCATTGGCGTGGAACGCCAGTTGCTGTCAAGCGCATTCTTCCATCTCTTTCAGAAGATAGAATGGTGATTCAAGACTTTAGACATGAGGTCAATTTGTTGGTGAAGCTTCGACATCCCAATATAGTTCAGTTTCTTGGAGCTGTTACTGACAGGAAGCCCCTCATGTTAATTACTGAGTATCTAAGAGGGGGTGATCTTCACCAGTACCTCAAAGATAAAGGTTCACTTAATCCTGCAACAGCTATCAACTTTTCCATGGATATTGCCAGAGGAATGGCCTATCTTCACAATGAACCAAATGTTATAATTCATAGAGACCTAAAGCCAAGAAATGTTCTTTTAGTTAACTCTAGTGCTGACCATTTAAAAGTTGGAGATTTTGGATTGAGTAAGCTTATCACTGTCCAGAGTTCTCATGATGTATACAAGATGACTGGTGAAACTGGGAGCTATCGCTATATGGCTCCGGAAGTTTTCAAACATCGGAGGTATGAGAAGAAGGTTGACGTGTACTCATTTGCAATGATTTTGTATGAGATGCTTGAAGGTGAACCACCTTTTGCAAGTTATGAACCTTATGATGGAGCAAAATACGCAGCTGAAGGGCACAGACCTATTTTTCGAGCAAAGGGTTATATCCCTGAGTTGCAGGAGTTAACACAGCAGTGTTGGGCTGCTGATATGAATCAAAGACCTCATTTCATAGAGATCCTTAAGCGGCTTGAAAAGATTAAGGAAAATCTACCTTCAGATAATCATTGGCATTTGTTTGCTTCATAA 1257 0.4304 MSSGSSNKDKEKARVSRTSLILWHAHQNDAAAVRKLLQEDPSLVNATDYDNRTPLHVASLHGWIEVAKCLIEFGADVNAQDRWKNTPLADAEGSKRSNIIELLKSHGGLSYGQTGSHFEPRAVPPPLPNKCDWEVDPSELDFSSSARIGKGSFGEILKAHWRGTPVAVKRILPSLSEDRMVIQDFRHEVNLLVKLRHPNIVQFLGAVTDRKPLMLITEYLRGGDLHQYLKDKGSLNPATAINFSMDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLITVQSSHDVYKMTGETGSYRYMAPEVFKHRRYEKKVDVYSFAMILYEMLEGEPPFASYEPYDGAKYAAEGHRPIFRAKGYIPELQELTQQCWAADMNQRPHFIEILKRLEKIKENLPSDNHWHLFAS* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3580 418 ProSitePatterns Protein kinases ATP-binding region signature. 148 169 IPR017441 GO:0005524
Psa7g3580 418 SMART ANK_2a 50 79 IPR002110 GO:0005515
Psa7g3580 418 Gene3D - 2 117 IPR036770 -
Psa7g3580 418 PANTHER SERINE/THREONINE-PROTEIN KINASE STY8-LIKE 5 410 - -
Psa7g3580 418 Gene3D Phosphorylase Kinase; domain 1 134 221 - -
Psa7g3580 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 261 273 IPR008271 GO:0004672|GO:0006468
Psa7g3580 418 PIRSF ILK 1 418 - -
Psa7g3580 418 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 5 410 - -
Psa7g3580 418 ProSiteProfiles Protein kinase domain profile. 142 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g3580 418 ProSiteProfiles Ankyrin repeat profile. 50 82 IPR002110 GO:0005515
Psa7g3580 418 SMART serkin_6 142 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g3580 418 PRINTS Tyrosine kinase catalytic domain signature 217 230 IPR001245 GO:0004672|GO:0006468
Psa7g3580 418 PRINTS Tyrosine kinase catalytic domain signature 255 273 IPR001245 GO:0004672|GO:0006468
Psa7g3580 418 PRINTS Tyrosine kinase catalytic domain signature 371 393 IPR001245 GO:0004672|GO:0006468
Psa7g3580 418 Gene3D Transferase(Phosphotransferase) domain 1 222 414 - -
Psa7g3580 418 CDD STKc_MAP3K-like 148 400 - -
Psa7g3580 418 SUPERFAMILY Protein kinase-like (PK-like) 141 413 IPR011009 -
Psa7g3580 418 Pfam Protein tyrosine and serine/threonine kinase 145 400 IPR001245 GO:0004672|GO:0006468
Psa7g3580 418 ProSiteProfiles Ankyrin repeat region circular profile. 50 82 - -
Psa7g3580 418 SUPERFAMILY Ankyrin repeat 21 108 IPR036770 -
Psa7g3580 418 Pfam Ankyrin repeats (many copies) 36 88 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3580 Psa-Chr7 293315436 293322627 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3580 3 418 MAP Kinase Kinase Kinase AT1G14000 82.692 0.0 719
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Psa7g3580 PK_Tyr_Ser-Thr 5.5e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3580 - - gmx:100793237 782.711