Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3571 ATGGTTATCAGAGAGAGTGGACTCAACAACAACCCTATTTTTCTCAATTTCAGTGAAACTAAGTCGAAACATAGTCCAAAAACAAACAACATGGATTCTTCCTCGCTCACCAACACTCCTTTCCAAGTCAACCTTAGTCCCTCCTCAGAAAATCATCAAGCAGTAACCGAGTTTGATTTCTTTAAGGATTACAACAACAATGATCATACTAAGGTTGTTGTCTCTCCATCTGCTTATGCCGATGCTGCTGTCTCTGTCTTTGACATTGATCGTACCAACGTGCCATCTTTTCTGGATTTCAAACTATGCCTTGGCACTGGTCTCGATCTCGGTCGCAAAGTTGTTGCTACCAATGATGCTGCTGGTGATCAAGATGAGGATAACCTGTCGTCTAAATCCGATGACGAAAACACTAAGAATGAGATGGCTGTTCTTCGAGGCAAGCTTGCTCGAATGAAAAAGGAGAATGGTCGATTGAGTTTGATGGTTGAACAGCTTCAAACAGATTATGATATGCTGCAGATGAATTTTGAGAAAGTGATGCAAGGCGAGAAGGCTGAGGAAGTCGAAGAACAAGAAGGGTTTGATGGAAAATTTGAAAAGAAAAGGAAACTTGAGGATGGTGAAGCATCGGTTCCGAGAGATCTTTTGAAGCTTGAATTGGCTATTAATGCTGATGTTGAGATCGATCCTGAGCCCTCTTCTTCAAGAACATTGAGTTCTGATCGATTGGAATCCCCACCGGAGAACAACATTGAAGTTGCTTCGAAGGAGTTAGTCCTGAGTAAGAATGGGAACGCGAGTGACGAAGAAAAGGAGGAGGACGGTAAAGAGATTGAAAGAGAGGATAGTCCAATTCCTCATGCTGAGAGAATTCAAAGGATGAGTCCTCCGAACTATGCCCCAAATTTTGTTGATGCTGATGCTAACTCGAGGAGAGCAAGAGTTTCTGTTAGAACAAGATCAGAGGGAAACACGGTTTCTGATGGATGTCAATGGAGAAAGTATGGCCAGAAAATGGCAAAAGGTAACCCGAGTCCTCGTTCTTATTATAGGTGCACTATGGCTGCTGGTTGTCCGGTTAGAAAACAGGTACAAAAAAGTGCTGAAGACAAAACCGTGGTAGTTACAACCTATGAAGGATACCATAACCATACTTTACCTGCAGCAGCCAGGGAAATGGCACACACAATTGCAGCAGCTGCAAGAATGCTTCTTTCCGGATCAACCTCAAGCAACGACGCAGCAATGAATGTGGGTCTCCTCCGAAGAGCAACTCTCCTTGGTTCTTCGAGCCTCGCAACTATCTCAGCTTCTGCTCCGTTTCCAACCGTAACGCTCGACTTTACTCAACCTCCAAATCCTCACCAACTCCAACTGCTTCGAAACCAGTTACAAGTTCCTTTGCCTCAGATGCTGAATCAGCTTTAG 1431 0.4396 MVIRESGLNNNPIFLNFSETKSKHSPKTNNMDSSSLTNTPFQVNLSPSSENHQAVTEFDFFKDYNNNDHTKVVVSPSAYADAAVSVFDIDRTNVPSFLDFKLCLGTGLDLGRKVVATNDAAGDQDEDNLSSKSDDENTKNEMAVLRGKLARMKKENGRLSLMVEQLQTDYDMLQMNFEKVMQGEKAEEVEEQEGFDGKFEKKRKLEDGEASVPRDLLKLELAINADVEIDPEPSSSRTLSSDRLESPPENNIEVASKELVLSKNGNASDEEKEEDGKEIEREDSPIPHAERIQRMSPPNYAPNFVDADANSRRARVSVRTRSEGNTVSDGCQWRKYGQKMAKGNPSPRSYYRCTMAAGCPVRKQVQKSAEDKTVVVTTYEGYHNHTLPAAAREMAHTIAAAARMLLSGSTSSNDAAMNVGLLRRATLLGSSSLATISASAPFPTVTLDFTQPPNPHQLQLLRNQLQVPLPQMLNQL* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3571 476 ProSiteProfiles WRKY domain profile. 322 388 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa7g3571 476 MobiDBLite consensus disorder prediction 231 247 - -
Psa7g3571 476 PANTHER OS05G0567200 PROTEIN 46 471 - -
Psa7g3571 476 MobiDBLite consensus disorder prediction 264 289 - -
Psa7g3571 476 SMART WRKY_cls 327 387 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa7g3571 476 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 46 471 IPR044810 GO:0003700
Psa7g3571 476 Coils Coil 135 169 - -
Psa7g3571 476 MobiDBLite consensus disorder prediction 229 300 - -
Psa7g3571 476 SUPERFAMILY WRKY DNA-binding domain 319 388 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa7g3571 476 Pfam WRKY DNA -binding domain 329 385 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa7g3571 476 Gene3D WRKY domain 311 389 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3571 Psa-Chr7 291568592 291571288 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3571 106 451 WRKY Transcription Factor Family AT1G62300 43.305 4.08e-71 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa7g3571 WRKY 3.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3571 - - gmx:100797998 343.584