Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3566 ACGGTTGCAGTTAAAGTTCTTGGTGCTAATTCAAGACAAGGAGAACAAGAATTTTTAACTGAGGTTCCATTACTTGGAAGATTACATCACAAAAACCTTGTGGCTTTGGTGGGATATGCTGCGGAAAGAGGACGACATATGCTCCTTTACATTTACATGAGCAATGGCAGTCTTGCTTCTCATTTATATGGAAAAGATTATGAGCCATTAAGCTGGGATTTGAGACTTAGCATAGCACTAGATGTTGCGAGGGTGCTGGAA 261 0.4061 TVAVKVLGANSRQGEQEFLTEVPLLGRLHHKNLVALVGYAAERGRHMLLYIYMSNGSLASHLYGKDYEPLSWDLRLSIALDVARVLE 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3566 87 Gene3D Transferase(Phosphotransferase) domain 1 1 87 - -
Psa7g3566 87 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 1 87 - -
Psa7g3566 87 ProSiteProfiles Protein kinase domain profile. 1 87 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g3566 87 SUPERFAMILY Protein kinase-like (PK-like) 2 86 IPR011009 -
Psa7g3566 87 Pfam Protein tyrosine and serine/threonine kinase 1 86 IPR001245 GO:0004672|GO:0006468
Psa7g3566 87 PANTHER OS01G0253100 PROTEIN 1 87 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3566 Psa-Chr7 290583676 290583936 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3566 2 84 Receptor kinase-like Gene Family AT2G37050 53.488 3.63e-24 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Psa7g3566 PK_Tyr_Ser-Thr 3.2e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3566 - - gmx:100816549 146.362