Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3564 ATGAATAGCAGTGGTGGCAGTAACGGCGGCGGCGGAGGAGGGATGATGATGGGTTTCAGTAAATCATCACCTTTTACAGTTTCTCAGTGGCAGGAACTCGAACATCAAGCTTTGATCTTTAAGTATATGGTTGCTGGTCTTCCTGTTCCACCTGACCTCGTTCTTCCCTTTCACTCTCACAACTTCTTTCACCATTCAATTCCTACCCTGAGTTATTGTTCCTTCTATGGAAAGAAGGTGGACCCGGAGCCAGGACGATGTAGGAGGACCGATGGAAAAAAATGGAGATGCTCTAAGGAAGCATACCCGGACTCCAAATACTGTGAGCGCCACATGCACCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAATCACAAACAATGCCATCATCATCATCATCATCCACTCTTGTCGCTGCTCCCACCACTACACCTCCAAACTTCCACAACCTTCCCTCAACAAATGCCTTTGCTACTCAAGATTATCATCTCGATACCATTCCCTATGGGATTCCAAGTAAACAATACAGGTATCTTCAAGGTCTTAAGTCTGAGGGTGGAGAACATAGCTGCTTTGCAGAAGCTTCAGGAGGCGGCAACAAAGGTCTCCAAATGGAGTCTCAGCTAGAAAGCACATGGCCTTTGATGTCAACCAGAGTTTCCTCTTTTTCTGCATCAAAATCAAGTAATAATTCCATGTTGCAGAGTGATTATCCCCAGCATTCATTTTTATCAACTGAGTATGGATCTGGAGAAGCTGTGAAGGAAGAGGGCCAGCCTCTTCGATCCTTTTTCAACGAATGGCCTAAGAGCAGGGAATCATGGTCTGGTTTGGAAGATGAAAGATCCAACCAAATAGCCTTCTCCACTACTCAACTCTCAATATCCATTCCCATGTCATCTTCTGACTTCTCTGCCACAAGCTCTCAGTCGCCACACGATAACTAG 948 0.461 MNSSGGSNGGGGGGMMMGFSKSSPFTVSQWQELEHQALIFKYMVAGLPVPPDLVLPFHSHNFFHHSIPTLSYCSFYGKKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVESQTMPSSSSSSTLVAAPTTTPPNFHNLPSTNAFATQDYHLDTIPYGIPSKQYRYLQGLKSEGGEHSCFAEASGGGNKGLQMESQLESTWPLMSTRVSSFSASKSSNNSMLQSDYPQHSFLSTEYGSGEAVKEEGQPLRSFFNEWPKSRESWSGLEDERSNQIAFSTTQLSISIPMSSSDFSATSSQSPHDN* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3564 315 PANTHER - 22 308 IPR031137 GO:0005634|GO:0006351|GO:0032502
Psa7g3564 315 MobiDBLite consensus disorder prediction 108 141 - -
Psa7g3564 315 Pfam QLQ 24 56 IPR014978 GO:0005524|GO:0005634|GO:0006355
Psa7g3564 315 ProSiteProfiles QLQ domain profile. 24 59 IPR014978 GO:0005524|GO:0005634|GO:0006355
Psa7g3564 315 Pfam WRC 82 124 IPR014977 -
Psa7g3564 315 ProSiteProfiles WRC domain profile. 81 125 IPR014977 -
Psa7g3564 315 MobiDBLite consensus disorder prediction 122 141 - -
Psa7g3564 315 PANTHER GROWTH-REGULATING FACTOR 5 22 308 - -
Psa7g3564 315 SMART QLQ_2 23 59 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3564 Psa-Chr7 289565129 289568390 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3564 16 124 GRF Transcription Factor Family AT3G13960 58.065 2.95e-42 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Psa7g3564 WRC 1.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3564 - - gmx:100787226 431.795