LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa7g3536	ATGAGTTGGTCTTCCTTTTATCACACAGCCTCGAGGGTTTTTCATGAGTATCCATCCTGGTCTAAGTCTGTTGTTGTATGCACTATCATCAGTGGGGGAGGTCTAGCTGCATATAGTGATACCAGATCAGCATATAGTGATAATGGTGACCAGTTCCCAAAAAAGAAGGTGGTGGTTCTTGGAACTGGTTGGGCTGGAACTAGTTTTGTGAAAAGCATGAAAAACTCCTCCTATGATATTCATGTTGTTTCACCGCGTAACTATTTTGCATTCACTCCTTTGTTACCGAGTGTCACTTGTGGCACGGTGGAGGCACGAAGCATCGTTGAACCTATCCGAAATATCAGCAGAAAGAGTGGTTTAGATGTTCAATTCAGTGAAGCTGAGTGCTATAAGATTGATCCAAAGAACAACAAAGTTTACTGCAGAGCTAGTCATGACAAAAAGCTTGGTGGCACAGAAGAATTTTCACTTGATTATGATTACTTAGTAATAGCTATGGGAGCTCGTTCTAATACATTTAATACACCTGGTGTTGAGGAACATGCCTACTTCTTGAAGGAAGTGGAAGATGCTCAAAGAATCCGGCACAAAGTGATTAACCTTTTTGAAAGAGCAAGCCTTCCTTGTGTACCGGTGGAAGAGAAGAAAAGGCTTCTCAGTTTTGTAATTGTTGGTGGTGGTCCAACTGGTGTAGAGTTTGCAGCAGAGCTATATGATTTTGTGCATGAAGATCTGTCAAAGTTATATCCTTCTCTTAAAGACCATGTCAAGATTACTCTCCTCGAGGCTGGTTATCATATCTTAAACATGTTTGACAAGAGAATAACCGAATTTGCTGAAGAAAAGTTCAAAAGAGATGGAATTGATGTGAAATTAGGATCTATGGTTGTGAAAGTTGGTGAAAAAGAAATCTCATCAAAAGAAAGAGGAAGTGGTGAAGTTGCTACATTACCTCATGGGATGGTAGTTTGGTCCACCGGTATCGGTGCTCGTCCTGAAGTAGTTGATTTTATGAAGCAACTTGGTCAGATTAACAGACGTGCATTGGTGACCGATGAATGGCTGAGGGTGGAAGGGTGCGACAACATCTATGCTCTAGGTGATTGTGCGACTATTAATCAACGTAAAGTTATGGAAGATATAGCCGTGATATTTAGCAAAGCAGACAAGGAAAATACCGGTATGTTAGATCTTAAAGAATTTCAAAACGTTGTTGGAGATATTATTGAGAGGTATCCACAAGTGGACATTTATTTAAAAAGTCAAATGAAAGACATGGCTTCTTTGCTAAGTAAATCTCAGGAAAGCCCTACTACAGTTGTGGACATTGAATACTTTAAACAAGCTCTTTCCAAGGTTGATTCTCAGATGAAAAATCTTCCCGCAACAGCTCAGGTAGCTGCTCAACAAGGAACCTATCTCGCAGACTGTTTCAATCGTATGGAATTCTGTGAGAGGTATCCGGAAGGCCCTCTAAGGTTTAGAGGAACAGGACGCCATCGGTTTCGTGCTTTCAGGTACAAGCATTTTGGACAATTTGCTCCTCTTGGCGGAGAACAAACTGCGGCTCAGCTTCCAGGAGATTGGGTTTCAATTGGTCATAGCAGTCAGTGGTTGTGGTATTCAGTATATGCAAGCAAACAAGTCAGCTGGAGAACAAAGGCTTTGGTGATAGCTGATTGGGGAAGACGATTCCTATTTGGCAGAGACTCAAGTCAAATCTGA	1728	0.4138	MSWSSFYHTASRVFHEYPSWSKSVVVCTIISGGGLAAYSDTRSAYSDNGDQFPKKKVVVLGTGWAGTSFVKSMKNSSYDIHVVSPRNYFAFTPLLPSVTCGTVEARSIVEPIRNISRKSGLDVQFSEAECYKIDPKNNKVYCRASHDKKLGGTEEFSLDYDYLVIAMGARSNTFNTPGVEEHAYFLKEVEDAQRIRHKVINLFERASLPCVPVEEKKRLLSFVIVGGGPTGVEFAAELYDFVHEDLSKLYPSLKDHVKITLLEAGYHILNMFDKRITEFAEEKFKRDGIDVKLGSMVVKVGEKEISSKERGSGEVATLPHGMVVWSTGIGARPEVVDFMKQLGQINRRALVTDEWLRVEGCDNIYALGDCATINQRKVMEDIAVIFSKADKENTGMLDLKEFQNVVGDIIERYPQVDIYLKSQMKDMASLLSKSQESPTTVVDIEYFKQALSKVDSQMKNLPATAQVAAQQGTYLADCFNRMEFCERYPEGPLRFRGTGRHRFRAFRYKHFGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKQVSWRTKALVIADWGRRFLFGRDSSQI*	576

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa7g3536	575	PRINTS	FAD-dependent pyridine nucleotide reductase signature	57	76	-	-
	Psa7g3536	575	PRINTS	FAD-dependent pyridine nucleotide reductase signature	160	178	-	-
	Psa7g3536	575	PRINTS	FAD-dependent pyridine nucleotide reductase signature	221	239	-	-
	Psa7g3536	575	PRINTS	FAD-dependent pyridine nucleotide reductase signature	349	371	-	-
	Psa7g3536	575	Pfam	Pyridine nucleotide-disulphide oxidoreductase	55	380	IPR023753	GO:0016491
	Psa7g3536	575	ProSiteProfiles	EF-hand calcium-binding domain profile.	377	412	IPR002048	GO:0005509
	Psa7g3536	575	PANTHER	NADH DEHYDROGENASE	73	575	IPR045024	GO:0003954\|GO:0006116
	Psa7g3536	575	SUPERFAMILY	FAD/NAD(P)-binding domain	214	374	IPR036188	-
	Psa7g3536	575	PANTHER	NAD(P)H DEHYDROGENASE B2	73	575	-	-
	Psa7g3536	575	SUPERFAMILY	EF-hand	371	461	IPR011992	-

Showing 1 to 10 of 13 entries

Previous1 2Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa7g3536	Psa-Chr7	283092346	283095825	Dispersed/Transposed

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Psa7g3536	5	575	Chloroplast and Mitochondria Gene Families	AT4G21490	69.550	0.0	814

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa7g3536	K03885		-	gmx:100820044	973

Showing 1 to 1 of 1 entries