Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3494 ATGTTCTCTGCAGTGACAAAACCGGGATCTCTGACCTTAAATAAGTTGTCTGTTGATAAAAATTTGATTGAGGTTTTTGCTAAGAATGTAGAGAAGGATTATGTTATCCTTCTTGCAGCAAGGGCTTCTAGGACTGAGAATCAGGATGCAATAGATGCTGCAATTGTTGATATTGAACCTCTGCAACTGCAAAGAGGATGTCAGGAAGAAAGCTCATTCGTAATTGACAAGTTCGCCGAGCGTGGACTCCGTTCTTGGGTGTTGCTAGACAGGAAGTACCTGGAGAAAAATAAAGATAGCCCTGGTGCACCATGGCAATTTGTTGGTCTGTTACCACTATTTGATCCTCCTAGGCATGATAGTGCTGAAACCATCACAAGAGCTCTGAACTTGCTTAACCATTGTTTGGATTTCACATTCTCTAGTGATCAGCTTGCCATTGCCAAGGAAACTGGCCGAAGGCTTGGGATGGGAACAAACATGTATCCATCTTCGTCATTACTTCGGTCAAAGCAAGGATGCTGCTGTGCAGCTCTTCCAGTTGACGAGTTGATTGAGAAGGCTGATGGATTTGCTGGAGTATTTCCTGATGCTGCTAGAGGTGCTTCTGATATTGTCCTTACTGAACCCGGTCTAAGTGTTATTATTAGTGCAGTGCTCACCAGCAGGGCAATTTTCCAAAGGATGAATAATTATACTATCTATGTTGTGTCAATCACCATTCGTATTGTGTTTGGTTTCATGTTATTGCGTTGA 756 0.4259 MFSAVTKPGSLTLNKLSVDKNLIEVFAKNVEKDYVILLAARASRTENQDAIDAAIVDIEPLQLQRGCQEESSFVIDKFAERGLRSWVLLDRKYLEKNKDSPGAPWQFVGLLPLFDPPRHDSAETITRALNLLNHCLDFTFSSDQLAIAKETGRRLGMGTNMYPSSSLLRSKQGCCCAALPVDELIEKADGFAGVFPDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMNNYTIYVVSITIRIVFGFMLLR* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3494 251 Gene3D - 68 114 IPR023299 GO:0000166
Psa7g3494 251 PRINTS P-type cation-transporting ATPase superfamily signature 4 18 - -
Psa7g3494 251 PRINTS P-type cation-transporting ATPase superfamily signature 109 120 - -
Psa7g3494 251 PRINTS P-type cation-transporting ATPase superfamily signature 196 208 - -
Psa7g3494 251 Gene3D - 211 250 - -
Psa7g3494 251 PANTHER CALCIUM-TRANSPORTING ATPASE 197 250 - -
Psa7g3494 251 PANTHER CALCIUM-TRANSPORTING ATPASE 73 197 - -
Psa7g3494 251 PANTHER CALCIUM-TRANSPORTING ATPASE 7 58 - -
Psa7g3494 251 PRINTS H+-transporting ATPase (proton pump) signature 71 89 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa7g3494 251 PRINTS H+-transporting ATPase (proton pump) signature 188 204 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa7g3494 251 Gene3D - 198 210 IPR023214 -
Psa7g3494 251 Gene3D - 115 196 IPR023214 -
Psa7g3494 251 PANTHER PLASMA MEMBRANE ATPASE 73 197 - -
Psa7g3494 251 PANTHER PLASMA MEMBRANE ATPASE 7 58 - -
Psa7g3494 251 PANTHER PLASMA MEMBRANE ATPASE 197 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3494 Psa-Chr7 276288869 276290393 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3494 7 250 Primary Pumps ATPases AT2G24520 54.464 4.76e-103 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3494 K01535 - gmx:100785442 310.071