Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3447 ATGTCCATCACAAACCAATCCCAAGCTGAAGCTTCAGCTTCTCCCACCTCAACAACAAAACCCACCTCCAAGAACCGTGATTCAACATTCCACGGCGTGCGAAAGCGAACATGGGGACGCTACGTTTCAGAAATAAGACTACCGGGTCAGAAAACTCGAATATGGCTTGGTTCATTTCAGACAGCTGAAATGGCGGCGCGTGCTTATGACTCCGCGGCTTTCTTCTTAAAAGGTAGCTCGGCTAGCCTTAATTTCCCCGAAGAGGTTGCGTTTTTACCTCGTCCTGGTTCTTCTTCAAGGAAAGACATTCAATCGGCGGCGGCTAAAGCGGCTCATCAACGAAGCCGCCACCATCAACAACAATCTTCTTCTTCCATCGAAACCAAAAATAAAAATGAAAATGAAAATATTATTATTATTAATAATGAAAATAATAATATTAATAATAGTAATAATAATAATAATGGCATTGATGATTTTTCTATTGAGACGATGGAGTTGTGGAATCAAGAAGAATGTTCTTCGACGACGTCGTTTTGGGATATGAAAGATGCTCCTCTAATGAGTCCAACAAGGGTGGGGTCCATTTATGGAGATATGCTGACATGGAACGAAGTGTTTGATTTCAATGATGACATTCTTCTAGCCATGGCGCATCCATAA 663 0.4163 MSITNQSQAEASASPTSTTKPTSKNRDSTFHGVRKRTWGRYVSEIRLPGQKTRIWLGSFQTAEMAARAYDSAAFFLKGSSASLNFPEEVAFLPRPGSSSRKDIQSAAAKAAHQRSRHHQQQSSSSIETKNKNENENIIIINNENNNINNSNNNNNGIDDFSIETMELWNQEECSSTTSFWDMKDAPLMSPTRVGSIYGDMLTWNEVFDFNDDILLAMAHP* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3447 220 Gene3D AP2/ERF domain 29 88 IPR036955 GO:0003700|GO:0006355
Psa7g3447 220 CDD AP2 28 87 IPR001471 GO:0003700|GO:0006355
Psa7g3447 220 SMART rav1_2 29 92 IPR001471 GO:0003700|GO:0006355
Psa7g3447 220 MobiDBLite consensus disorder prediction 117 132 - -
Psa7g3447 220 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF036-LIKE 13 156 - -
Psa7g3447 220 SUPERFAMILY DNA-binding domain 28 87 IPR016177 GO:0003677
Psa7g3447 220 MobiDBLite consensus disorder prediction 94 132 - -
Psa7g3447 220 Pfam AP2 domain 30 78 IPR001471 GO:0003700|GO:0006355
Psa7g3447 220 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Psa7g3447 220 PRINTS Ethylene responsive element binding protein signature 52 68 IPR001471 GO:0003700|GO:0006355
Psa7g3447 220 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 13 156 - -
Psa7g3447 220 MobiDBLite consensus disorder prediction 1 31 - -
Psa7g3447 220 MobiDBLite consensus disorder prediction 1 26 - -
Psa7g3447 220 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3447 Psa-Chr7 271064981 271066159 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3447 22 104 AP2-EREBP Transcription Factor Family AT1G01250 61.446 3.83e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Psa7g3447 AP2 2.2e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3447 K09286 - gmx:100783790 156.377