Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3439 ATGGCATTCCAATGGCATAATCTCTTCAAAATAACCTTCACCCTTCTATTCATCTCAACACTAATTCAATCTACAACATCTACACCAAACACCACCACAAATTCCACATCAACAACATACAAAAAGTTCTTAAAGAACCAATGCAACTCAACCACATACCCTAACGTTTGCTACAAGTCACTTTTCCCGTACACATCAAAAATCAAAACAAACACTTTAACACTCACCAAAATCGCTATCTACCTAGCTCTAAAATCGTCAAGAAGTGCATCAATGACATTGAAAAACCTAAGTTCCAAGAAACTAACACATGCCGAAACATTGGTTATCGCCGATTGCAGCGAAAACGTCGATGACTCGGTGGATTCGCTCGAGCAATCAGCTGATGGGCTAGTGCATTTGAATGGAACTAGAACTAATGATGAGAAGTTTCAATGGGATACTATAAAGACATGGATGAGTTCGGTTATAACAAATGCGGGAACATGTACGGATGAGTTTGATGAAATGGAAGTGAGATCTTCAGTACAAAAGAAGATTAAAACAAGTGTTGGTAATCTTGCTTCATTGACTAGTAATGCTCTTGCTTTTGTAAATAGACTTTCCTATTAA 612 0.3758 MAFQWHNLFKITFTLLFISTLIQSTTSTPNTTTNSTSTTYKKFLKNQCNSTTYPNVCYKSLFPYTSKIKTNTLTLTKIAIYLALKSSRSASMTLKNLSSKKLTHAETLVIADCSENVDDSVDSLEQSADGLVHLNGTRTNDEKFQWDTIKTWMSSVITNAGTCTDEFDEMEVRSSVQKKIKTSVGNLASLTSNALAFVNRLSY* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3439 203 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 202 IPR035513 -
Psa7g3439 203 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 201 IPR035513 -
Psa7g3439 203 SMART PMEI_2 39 197 IPR006501 GO:0004857
Psa7g3439 203 CDD PMEI-like_3 48 202 - -
Psa7g3439 203 PANTHER PECTINESTERASE INHIBITOR-LIKE 4 201 - -
Psa7g3439 203 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 4 201 - -
Psa7g3439 203 TIGRFAM PME_inhib: pectinesterase inhibitor domain 13 201 IPR006501 GO:0004857
Psa7g3439 203 Pfam Plant invertase/pectin methylesterase inhibitor 43 196 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3439 Psa-Chr7 270084595 270086215 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3439 22 202 Carbohydrate Esterase AT1G53830 28.108 9.33e-15 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3439 - - mtr:MTR_4g035855 304.679