Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3419 ATGGATCCTGTCCTGCTCAATCATGTCCAAACCATCAAGAAACACCGTATCCAAACCAGTTGGCATTATGCCAACAAACCACCACAAATCCTGCTATACCAACCTGCTGCAACGCCTAACCTGCACAAACCAAAGTCCCAGCTAGTACTCAATCGAAAAAACTTGATAAAATTCCGAAAGACTATGAAGCTGTCATTGGTATTGAAACTCATGTTCAGCTTTCTGCACTTACCAAAGCCTTTTGTAAATTGTCTTGAACAATTAATGGATCATTTCCCACAAGTAGCATTGTCCGGTTTGTACATGGGTTTGCCGGGTGCTTTGCCTGTTTTGAACTCTAAGATTTCTCAGTTTGATGTTCCAATTGCTGCTTCTGGTAAAGCATTTCCAACATTGGATCCAAGGACAGGGGAAGTGATTACTCATGTTGCTGAGGGTCACTCTGAAGATATTGATAGGGCTGTTGCAGCTGCGCGTAAAGCATTCGATTTTGGGTCGTGGCCTAGGATGACAGCCTATGAAAGGCAAAAGATAATGTTATCATTCCATGGAACTTCCCTCTTCTCATGTTTGTACGTGCAGACCTTGCATGAACCGATTGGTGTTGCTGGTCAGATCATTCCATGGAACTTCCCTCTTCTCATGTTTGGTTGGAAGGTAGGACCGGCATTGGCATGCGGTGCTGCTCTTGCTAGTCACATGGATGTCGATAAGGTTGCATTCACTGGTTCGACTGCTACTGGAAAGGTTATCCTTCAACTGGCAGCTCAAAGCAATCTTAAACAAGTAACTTTGGAGCTTGGTGGGAAATCTCCGTTTATTGTATGCGAAGATGCTGACGTAGATAAGGCTGTTTGA 858 0.4406 MDPVLLNHVQTIKKHRIQTSWHYANKPPQILLYQPAATPNLHKPKSQLVLNRKNLIKFRKTMKLSLVLKLMFSFLHLPKPFVNCLEQLMDHFPQVALSGLYMGLPGALPVLNSKISQFDVPIAASGKAFPTLDPRTGEVITHVAEGHSEDIDRAVAAARKAFDFGSWPRMTAYERQKIMLSFHGTSLFSCLYVQTLHEPIGVAGQIIPWNFPLLMFGWKVGPALACGAALASHMDVDKVAFTGSTATGKVILQLAAQSNLKQVTLELGGKSPFIVCEDADVDKAV* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3419 285 SUPERFAMILY ALDH-like 123 285 IPR016161 GO:0016491
Psa7g3419 285 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 228 285 IPR016162 GO:0016491
Psa7g3419 285 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL 123 182 - -
Psa7g3419 285 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL 192 228 - -
Psa7g3419 285 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL 227 285 - -
Psa7g3419 285 Pfam Aldehyde dehydrogenase family 125 183 IPR015590 GO:0016491
Psa7g3419 285 Pfam Aldehyde dehydrogenase family 227 285 IPR015590 GO:0016491
Psa7g3419 285 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 265 272 IPR029510 GO:0016491
Psa7g3419 285 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 118 186 IPR016162 GO:0016491
Psa7g3419 285 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 187 227 IPR016162 GO:0016491
Psa7g3419 285 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 192 228 - -
Psa7g3419 285 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 227 285 - -
Psa7g3419 285 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 123 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3419 Psa-Chr7 265858818 265860142 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3419 123 285 Aldehyde Dehydrogenase Gene Family AT1G23800 49.219 1.57e-70 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3419 K00128 - gmx:100777399 234.187