Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3413 ATGCCCAATCATCCTCCATACAATGAGATTGAAAAGAATAAAAAGAAACCCGGAGGAATCGTTGCTCTTCTCGATGAAGCATGCATGTTTCCAAAGTCAACACATGAAACGTTTGCAAACAAGCTTTATCAAACATTTAAGTATAACAAGCGCTTTATTAAGCCAAAATTTTCGCAAACAGATTTTACCATTGCTCATTATGCTGGAGAGGTGACATACCAATCTGATCAGTTTTTAGACAAAAACAAGGATTATGTGGTTCCTGAACATCAAGATTTATTGATTGCTTCCAAATGTCCTTTTGTGTCTGACCTTTTTCCACCACTCCCTGAAGAGACATCCAAATCTTCCAAATTCTCTTCAATAGGTTCTGGTTTTAAGCTACAACTACAGCAACTAATGGAAACATTAAGTTCTACAGAACCCCATTACATTAGATGTGTGAAACCAAACAACCTCCACAAGCCTGCAATTTTTGAGAACATCAACATTAGGCATCAACTTCGATGTGGTGGTGTGTTGGAGGCTATCAGGATCAGTTGTGCTGGATACCCTACACGCCGCGCTTTCGTTGAATTTGCGAACAGATTTGGTCTCTTTGCCCCGGAGGCCACGGAAGCCAACTGTGAAGAAAAGAATGTTTGCCAAAAGATTTTGGAAAAGACAGGGCTTAAAGGATATCAGATTGGAAAAACAAAGGTATTCTTGAGAGCTGGTCAGATGGCGGAACTAGATGCTCGGAGAGCTCAAGTACTTGGTAATGCAGCAAAAGTTATCCAACAGAACATACGGACCCATCAAACTCGGAAACATTATCTTGCATTGCAAAAGAAGACCATATATTTGCAGGCTTGGTGGAGAGGAAGACTAGCATTCAAACTCTTTGAGAAAATGAGAAGGGAAGCTGCTGCTGTGAAAATTCAAAAGAACATACGCAGTTATGAAGCTAGGAAGGCATATAAAGAACTTCATATGTCAGTAGTTACTATGCAAACAGCTTTAAGAGCCATTGCTGCCCGCAAGGAGTTCAGATTTGGGATACAGACCAAAGCTTCCATCATTATTCAGGCTCGGTGGCGGTGCCACAAAGCGGCCTTATATTATAAGAGGCTCAAGAAAGGCTCAATAGTTACACAATGTAGATGGAGAGGACGTTTAGCTATGGGAGAACTTAGGAAACTGAAAATGGTATATTTCTATGTTTACCATGATTCTTATACATTAAGTAGAACCTTAAAGAAAAGTAGATCTTTCAGAAATATATGA 1266 0.3981 MPNHPPYNEIEKNKKKPGGIVALLDEACMFPKSTHETFANKLYQTFKYNKRFIKPKFSQTDFTIAHYAGEVTYQSDQFLDKNKDYVVPEHQDLLIASKCPFVSDLFPPLPEETSKSSKFSSIGSGFKLQLQQLMETLSSTEPHYIRCVKPNNLHKPAIFENINIRHQLRCGGVLEAIRISCAGYPTRRAFVEFANRFGLFAPEATEANCEEKNVCQKILEKTGLKGYQIGKTKVFLRAGQMAELDARRAQVLGNAAKVIQQNIRTHQTRKHYLALQKKTIYLQAWWRGRLAFKLFEKMRREAAAVKIQKNIRSYEARKAYKELHMSVVTMQTALRAIAARKEFRFGIQTKASIIIQARWRCHKAALYYKRLKKGSIVTQCRWRGRLAMGELRKLKMVYFYVYHDSYTLSRTLKKSRSFRNI* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3413 421 PANTHER MYOSIN 14 397 - -
Psa7g3413 421 Gene3D - 347 397 - -
Psa7g3413 421 Gene3D - 303 346 - -
Psa7g3413 421 Gene3D - 252 302 - -
Psa7g3413 421 Gene3D - 183 250 - -
Psa7g3413 421 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 302 398 IPR027417 -
Psa7g3413 421 ProSiteProfiles IQ motif profile. 300 329 IPR000048 GO:0005515
Psa7g3413 421 SMART iq_5 370 392 IPR000048 GO:0005515
Psa7g3413 421 SMART iq_5 299 321 IPR000048 GO:0005515
Psa7g3413 421 SMART iq_5 322 344 IPR000048 GO:0005515
Psa7g3413 421 SMART iq_5 347 369 IPR000048 GO:0005515
Psa7g3413 421 SMART iq_5 251 273 IPR000048 GO:0005515
Psa7g3413 421 SMART iq_5 274 296 IPR000048 GO:0005515
Psa7g3413 421 ProSiteProfiles IQ motif profile. 323 352 IPR000048 GO:0005515
Psa7g3413 421 ProSiteProfiles IQ motif profile. 348 375 IPR000048 GO:0005515
Psa7g3413 421 Pfam IQ calmodulin-binding motif 277 295 IPR000048 GO:0005515
Psa7g3413 421 Pfam IQ calmodulin-binding motif 302 321 IPR000048 GO:0005515
Psa7g3413 421 Pfam IQ calmodulin-binding motif 349 369 IPR000048 GO:0005515
Psa7g3413 421 Pfam IQ calmodulin-binding motif 254 272 IPR000048 GO:0005515
Psa7g3413 421 Gene3D Kinesin motor domain 141 179 IPR036961 -
Psa7g3413 421 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 302 IPR027417 -
Psa7g3413 421 Pfam Myosin head (motor domain) 14 237 IPR001609 GO:0003774|GO:0005524|GO:0016459
Psa7g3413 421 ProSiteProfiles Myosin motor domain profile. 1 249 IPR001609 GO:0003774|GO:0005524|GO:0016459
Psa7g3413 421 ProSiteProfiles IQ motif profile. 275 304 IPR000048 GO:0005515
Psa7g3413 421 Gene3D Myosin VI head, motor domain, U50 subdomain 85 118 - -
Psa7g3413 421 Gene3D - 14 140 - -
Psa7g3413 421 PANTHER MYOSIN-9 14 397 - -
Psa7g3413 421 SMART MYSc_2a 1 250 IPR001609 GO:0003774|GO:0005524|GO:0016459
Psa7g3413 421 ProSiteProfiles IQ motif profile. 254 279 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3413 Psa-Chr7 264879228 264883184 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3413 14 396 Myosins gene family AT1G08730 75.196 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3413 K10357 - gmx:100792816 643.654