Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3382 ATGGGAAGAGCTCCATGTTGTGACAAAACAAGTGTGAAGAGAGGTCCATGGTCACCAGAAGAAGACTCAAAACTAAAAGACTACATAGAGAAACATGGAACTGGTGGGAATTGGATTTCTCTTCCTCATAAAGCTGGTTTGAAGAGATGTGGAAAGAGTTGTAGATTGAGATGGCTTAACTATCTTAGGCCAAACATTAAACATGGAGATTTTTCTGATGAGGAAGACAGAATAATTTGCAGTCTCTATGTTAATATTGGAAGCAGGTGGTCAATCATAGCTGCACAATTGCCAGGTAGGACAGACAATGATATCAAGAACTATTGGAACACAAAGTTGAAGAAAAAACTCATGGCTTTGCATCTTCCTAGGAAACCTTCATTTCCACCTTCATCTTCTTTCTTTGACTACTTCACTCAAACTCCAACTACATCCTTCACTAATCTTCAAACCATTTCACTTTCTTCAAATAACTACTATCCAAACACAAGTTTCAACCCTTTTTACCAAAACCAAGATTCCATGAATCCTCACATCATGCAATATAATAATAACTACCCTATTATCAAAGACAACAACATGTTTATGTTTGGAAGTGAAGGAAGTTGTAGTTCATCGGATGGAAGTTGCAAGGAAATCAAGCAAGAAGAAATTGGTTATCATCATCACATGTCTAGTACTACAGGCTTTGATGACTTCAACAATAATAGTAATAACTTTATGATAAATTGTAACAACAACAATGAAAGTGTTGTTGGTGGTGGTGAAAATATGAACCAATACGAAGAAAAATCAAATGGAGTTGGATATAGTTACAATAATATTAGTCAAAGTCAAACATTAACTCCATTACTAGGTTATGGTCTTGAAGATATTAAGCATTTGATTAGTAGCAACAACAACATCAACAAAGATTTTAATGTTGATGAAATTCATAAGAGTGAAGAGAATGGTATGTACTATTACCATTACTAG 975 0.3467 MGRAPCCDKTSVKRGPWSPEEDSKLKDYIEKHGTGGNWISLPHKAGLKRCGKSCRLRWLNYLRPNIKHGDFSDEEDRIICSLYVNIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMALHLPRKPSFPPSSSFFDYFTQTPTTSFTNLQTISLSSNNYYPNTSFNPFYQNQDSMNPHIMQYNNNYPIIKDNNMFMFGSEGSCSSSDGSCKEIKQEEIGYHHHMSSTTGFDDFNNNSNNFMINCNNNNESVVGGGENMNQYEEKSNGVGYSYNNISQSQTLTPLLGYGLEDIKHLISSNNNINKDFNVDEIHKSEENGMYYYHY* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3382 324 PANTHER OS09G0431300 PROTEIN 1 303 - -
Psa7g3382 324 SMART sant 13 64 IPR001005 -
Psa7g3382 324 SMART sant 67 115 IPR001005 -
Psa7g3382 324 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Psa7g3382 324 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Psa7g3382 324 PANTHER TRANSCRIPTION FACTOR RAX3 1 303 - -
Psa7g3382 324 Gene3D - 7 68 - -
Psa7g3382 324 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Psa7g3382 324 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Psa7g3382 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Psa7g3382 324 CDD SANT 16 62 IPR001005 -
Psa7g3382 324 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Psa7g3382 324 Gene3D - 70 127 - -
Psa7g3382 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3382 Psa-Chr7 261878478 261880582 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3382 1 119 MYB Transcription Factor Family AT5G57620 86.555 4.73e-76 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Psa7g3382 Myb_DNA-binding 1.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3382 K09422 - gmx:100779919 328.561