Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3349 ATGGCCAACACATCCCATTTCTTTCACCTTTTCATCTTCATGGCAACTTTGTTACTCATTTTCCCTCCATGTGAATCTCAAACAACTGAAACACAAGCACTTCTTCAATTCAAAGATCATTTAACCGATTCGTCGAACACTTTAGCTTCATGGAATGAATCAAGCACTCCATGCAACTTCCATGGAATCACATGTGCTCAACCATCTTTCAAAGTCATAGAAATCTCATTAGACGATAACTCGCTCTCGGGCGAAATTTTTCCATCAATCTCAATACTTCATAGCCTGCAAGTCCTTTCACTACCATCCAACTCCATTTCCGGAAAACTTCCTCCAGAAGTAACCAAATTCACACACCTCAGAGTCTTGAATCTATCCGGAAACGAACTCGTTGGTTCGATTCCGGATTTTTCTGGACTAAGAAGCCTCCGTGTTCTTGATCTTTCGGCGAACTTTTTCACCGGTAGAATCCCTAGTTGGATAGGGAATCTAACCGGACTTAATTCACTCGGCCTTGGAGAAAATCATTACACTGGTAGTATGATTCCAGAGAGTCTTGGAAATTTGAAAAATTTGACATGGCTTTACCTTGGCGGTGCTCAGTTGGTTGGAGAGATTCCAGAATCATTGTATGAAATGGAAGCATTGGAGACTTTGGATTTGTCAAGAAACAAGCTATCTGGAAAAATATCTAGTTCGATTTCGAAGCTGAAGAATGTTTACAAGATCGAATTGTTTTCGAACAATTTGACAGGCGGAATACCGGAAGAGCTCGCGAATTTAACCAATTTGCAAGAGATTGATATTTCTGCAAACAACATGTTTGGTAAATTGCCTAAGAGAATTGGTGATATGGTGAATTTGGCTGTTTTTCAGCTCTATGATAACAACTTTTCTGGTGAGATTCCTGTTGGATTTGGTGATATGGAGAATCTCAGAGGCTTTTCGGTTTACAGAAACCGTTTCACCGGTTCGATTCCGGAGAATTTCGGCCGATTTTCTCCTCTTGAGAGCATCGACGTGTCTGAGAATCAGTTTTCAGGTTTCTTCCCAAAGTACTTGTGTGAGAAGCAAAAGTTGACAATTCTGCTTGCATTGCAAAACAATTTCACTGGAAATATTTCTGAATCTTATGCTTCATGCAAGTCACTAGAGAGATTGAGGATCAGTGGAAATTTTTTATCTGGAAAAATTCCTAATGGTGTTTGGTCACTTCCGAATGCGAAGATAATTGATCTCGGGTTTAACAATTTCAGTGGTGAAGTTTCTTCACAGATTGGTAACTCAACAAATTTAACTGAGGTTGTTTTGACGAACAACATGTTTTCTGGTAAGGTTCCTTCAGAAATCGGAAAATTGGCGAATTTGGAGAAACTTTACTTGAGCAACAACAATTTCTCTGGTGAAATTCCACATGAGATTGGATTTTTAAAACAGTTATCCACTTTGCATTTGGAGGAAAATTCCTTAACTGGTTTAATACCTAAAGAGTTAGGCCATTGTTCAAGGCTTGTGGATTTGAATCTTGCATTGAATTCTCTATCTGGAAATATTCCGAACTCGGTTTCGCTTATGAGTTCGTTGAATTCGTTGAATTTGTCTAGAAACAAGTTAACAGGTTCGATTCCTGATAATTTGGAGAAAATAAAACTAAGTTCCGTTGATTTTTCTGATAATCTGCTTTCTGGTGGAATTCCGTTCGGGATACTTGTCATCGGGGGAGAGAAGGCTTTTGTTCGAAACAAAGGTTTATGTGTTGAGAAAATTCCAAGAAGTTCGATAAATTCGGATTTGAAGATTTGTGGTAATGATCATGGTCATAGAAGAGGTTTCTTTGGTTATAAATATATATTGCTCTTGGTAATTGCTGTTATCTTCATCGCTGCGGTTTTGATCTGTCGAAGCATCAAGATTCGAAGAGCGAAAAAGATACAACAGTCTCAGAAGGAAGCAAGTCAAAAGAAATGGAAACAAGCATCTTTTCACAAAGTGAATATTGATGCTGATGAAATAGGTCATCTGAATGAAGATAATTTGATCGGCCACGGTGGTACGGGAAAGGTTTATCGAGTCGCGTTGAAGAAAAACGGGATGGTAGTGGCCGTGAAGCAACTAGAGAAAGGCGACGGTATGAGGATTTTAGTTGCGGAAATGGAGATTTTAGGGAAAATTCGACATAAAAATATACTTAAACTTTATGCTTGTTTTCTCAGAAGTGGAACCAATCTTTTGGTTTTTGAGTATATGCCAAATGGTAATCTTTTTGAAGCTCTTCATAGAAATGTAAAAGATGAGAAGGTTGCATGGGATTGGAATCAGAGGTATAAAATTGCATTGGGAGGTGCAAAAGGGATTTGCTATTTGCACCATGACTGTTGTCCATCTGTTATTCATAGGGATATAAAATCTAGCAACATCTTGCTTGATGAATGTTATGAGGCAAAGATTGCTGATTTTGGTGTTGCTAGGTTTGCTGAAAAAACTCAGATGGGTCAAAGCTCTTTTGCAGGCACACATGGTTATATTGCTCCAGAACTCGCTTATTCAACTGAAGTAACCGAAAAAAGCGATGTGTACAGCTTCGGAGTAGTACTGTTAGAGTTAGTATCTGGAAGAAAACCTGTTGAAGAAGAATATGGAGAAGCAAAAGACATAGTTTATTGGGTTCTGAATAATCTGAATGACCGCGAAAGTGTACTCAACATTCTTGATGATAGAGTTGCATCAGCACATTGTGTTGAAGATATGATAAAAGTGTTGAAAATTGCTATTAAGTGCACTAATAGGCTTCCAACTTTGCGTCCTACAATGAGAGATGTTGTTAAGATGCTTATAGCTTCTGAGCCTTGCAAGAAGAAAACTAAAAGATGTGGTTTTGAGAAAGATTTAATGTCTAAAGCTACAATGTAA 2910 0.3821 MANTSHFFHLFIFMATLLLIFPPCESQTTETQALLQFKDHLTDSSNTLASWNESSTPCNFHGITCAQPSFKVIEISLDDNSLSGEIFPSISILHSLQVLSLPSNSISGKLPPEVTKFTHLRVLNLSGNELVGSIPDFSGLRSLRVLDLSANFFTGRIPSWIGNLTGLNSLGLGENHYTGSMIPESLGNLKNLTWLYLGGAQLVGEIPESLYEMEALETLDLSRNKLSGKISSSISKLKNVYKIELFSNNLTGGIPEELANLTNLQEIDISANNMFGKLPKRIGDMVNLAVFQLYDNNFSGEIPVGFGDMENLRGFSVYRNRFTGSIPENFGRFSPLESIDVSENQFSGFFPKYLCEKQKLTILLALQNNFTGNISESYASCKSLERLRISGNFLSGKIPNGVWSLPNAKIIDLGFNNFSGEVSSQIGNSTNLTEVVLTNNMFSGKVPSEIGKLANLEKLYLSNNNFSGEIPHEIGFLKQLSTLHLEENSLTGLIPKELGHCSRLVDLNLALNSLSGNIPNSVSLMSSLNSLNLSRNKLTGSIPDNLEKIKLSSVDFSDNLLSGGIPFGILVIGGEKAFVRNKGLCVEKIPRSSINSDLKICGNDHGHRRGFFGYKYILLLVIAVIFIAAVLICRSIKIRRAKKIQQSQKEASQKKWKQASFHKVNIDADEIGHLNEDNLIGHGGTGKVYRVALKKNGMVVAVKQLEKGDGMRILVAEMEILGKIRHKNILKLYACFLRSGTNLLVFEYMPNGNLFEALHRNVKDEKVAWDWNQRYKIALGGAKGICYLHHDCCPSVIHRDIKSSNILLDECYEAKIADFGVARFAEKTQMGQSSFAGTHGYIAPELAYSTEVTEKSDVYSFGVVLLELVSGRKPVEEEYGEAKDIVYWVLNNLNDRESVLNILDDRVASAHCVEDMIKVLKIAIKCTNRLPTLRPTMRDVVKMLIASEPCKKKTKRCGFEKDLMSKATM* 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3349 969 ProSitePatterns Serine/Threonine protein kinases active-site signature. 796 808 IPR008271 GO:0004672|GO:0006468
Psa7g3349 969 SMART LRR_typ_2 140 164 IPR003591 -
Psa7g3349 969 SMART LRR_typ_2 117 139 IPR003591 -
Psa7g3349 969 SMART LRR_typ_2 261 285 IPR003591 -
Psa7g3349 969 SMART LRR_typ_2 525 549 IPR003591 -
Psa7g3349 969 SMART LRR_typ_2 213 237 IPR003591 -
Psa7g3349 969 SMART LRR_typ_2 477 500 IPR003591 -
Psa7g3349 969 SMART LRR_typ_2 453 475 IPR003591 -
Psa7g3349 969 SUPERFAMILY L domain-like 55 347 - -
Psa7g3349 969 SUPERFAMILY RNI-like 243 563 - -
Psa7g3349 969 Pfam Leucine Rich Repeat 216 237 IPR001611 GO:0005515
Psa7g3349 969 Pfam Leucine Rich Repeat 455 477 IPR001611 GO:0005515
Psa7g3349 969 Pfam Leucine Rich Repeat 383 402 IPR001611 GO:0005515
Psa7g3349 969 ProSitePatterns Protein kinases ATP-binding region signature. 680 703 IPR017441 GO:0005524
Psa7g3349 969 Gene3D Ribonuclease Inhibitor 310 596 IPR032675 -
Psa7g3349 969 ProSiteProfiles Leucine-rich repeat profile. 119 141 IPR001611 GO:0005515
Psa7g3349 969 Pfam Leucine rich repeat 141 200 IPR001611 GO:0005515
Psa7g3349 969 SUPERFAMILY Protein kinase-like (PK-like) 671 944 IPR011009 -
Psa7g3349 969 SMART serkin_6 674 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g3349 969 PRINTS Leucine-rich repeat signature 216 229 - -
Psa7g3349 969 PRINTS Leucine-rich repeat signature 525 538 - -
Psa7g3349 969 Gene3D Phosphorylase Kinase; domain 1 633 748 - -
Psa7g3349 969 PANTHER RECEPTOR PROTEIN-TYROSINE KINASE CEPR2 9 957 - -
Psa7g3349 969 Pfam Protein kinase domain 676 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g3349 969 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Psa7g3349 969 Gene3D Ribonuclease Inhibitor 238 309 IPR032675 -
Psa7g3349 969 Gene3D Ribonuclease Inhibitor 182 237 IPR032675 -
Psa7g3349 969 Gene3D Ribonuclease Inhibitor 26 181 IPR032675 -
Psa7g3349 969 ProSiteProfiles Protein kinase domain profile. 674 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g3349 969 Gene3D Transferase(Phosphotransferase) domain 1 749 963 - -
Psa7g3349 969 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 9 957 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3349 Psa-Chr7 257027189 257031602 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3349 17 950 Receptor kinase-like Gene Family AT1G72180 54.545 0.0 989
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Psa7g3349 Pkinase 2.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3349 - - cam:101508379 1315.44