Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3328 TTTCAATGTTGGGCCACAACTTGTTTCTTGTCAGAAAAATGCTGGTGGTGGTGGTGGTGGTGGTGCTGGTTTTGAGATATTCGCTAAGGAATTGTATAATAGTTTGTCCAATTATACAGATGTTTTCAAAGGTGCAATCAAGAAAGAGTTGGGTTATTGCATAATGGATGTGGATGCTGATTGGGATGGTGCTTTCAATTTCACCAAGGATCTCACATTTTTGACCATGTGTGCCCAGGAAATGAAAGGAGATATTACACAGAGGATGTGCACGGCAGGAGAAATTGAAGCCTATGCTAGAAGTTTTGCAGGAGGCACTGGAAAAGCCAAAGGAAACCTACTGAAGCCAAACCTAAACTGTAATATGAGTTCTTGGCTTAATGGATGTGAGCCTGGTTGGGGCTGCAAAGCTAATCAGAAAGTTGATCTTAATAGTAAGAAGAAGGAAGTACCTGCTAGATCTGTTGATTGCCATCCTTGCTGTGAAGGGTTCTTTTGTCCTCGTGGCATCACATGCATGATACCTTGTCCTTTGGGCTCTTTTTGTCCTCGGGGGGAACTCAATAAAACTAGTGGGATATGTGCACCATATCGTTATCAGTTACCTCCTGGAAAAGATAACCATAGTTGTGGAGGAGCAGATATTTGGGCTGACATTGCAAGTAGTAGCGAGGTATTCTGTTCAGCAGGATCATACTGTCCATCTACAATCATAAAAAATTCTTGCAGTAGAGGGTCTTACTGCAGAACAGGTTCTACAGCTCAAGAGAGATGTTTCAGGCTTGCAAGTTGTGAGCCTAAATCAGCAAATCAAAATATTACTGCATATGGTCTCCTGGTTTTTGCCGGCTTGTGTTTTTTGCTGATTATCATATACAACTGTTCCGATCAAGTTCTCGCTACTCGAGAAAGAAGACAAGCAAAATCAAGAGAAAGGGCTGCTGCAAGTGTGAGAGAAACACAAGCGCGCGAAAAATGGAAATCAGCAAAAGACATTGCTAAGAAACATGCAACGGGACTACAATCACAGTTATCGCGTACATTTTCGCGCAAAAAAACATCGAAGATGCCAGATTTCAAAGGTGTGTTACCACCTATGCCTGGTTCATCAAAAGCAAAGAAAAAGGATAAAAACAACCTCTCAAAAATAATAAATGATATTGAGCAAGATCCTGATAGTCAAGAAGGGTTCAATGTGCAAATAGGAGATAAGAATGTGAAAAAGCAAGCACCGAGGGGTAAGCAGTTGCATACTCAGAGTCAAATTTTCAAATACGCGTATGGTCAGATCGAAAAGGAAAAGGCGTTACAGGAACAAAATAAGAACTTGACATTCTCTGGAGTGATTTCAATGGCTAATGACATTGATATAAGGAAGAGGCCTACAATTGAGGTTGCTTTTAAAGACTTAACACTCACGTTGAAAGGGAAAAACAAGCATCTGTTAAGATGTGTGACTGGTAAGATATATCCAGGCCGAGTTTCTGCAGTCATGGGTCCATCTGGGGCTGGTAAGACAACATTTCTTTCTGCTTTAACTGGAAAAGCAACTGGATGCCACACAACCGGTCAAGTTCTTGTAAATGGTCAGGAGTCGCCTATTCGATCATTCAAGAGGATCATTGGCTTTGTTCCACAAGATGATATTGTCCATGGAAATTTGACAGTTGAAGAGAATCTGTGGTTTAGTGCCAGATGCAGACTCTCGGCTGATCTACCGAAAGAAGAGAAGGTGTTGGTGGTTGAAAGAGTCATTGAATCTTTGGGTCTGCAGGCAATACGAGATTCTTTGGTTGGGACAATAGAGAAACGAGGAATCTCTGGAGGTCAAAGGAAGAGAGTAAACGTTGGATTAGAAATGGTTATGGAACCTTCTCTTCTAATTTTGGATGAACCTACATCCGGTTTGGACAGTTCATCTTCACAATTACTGCTTAGAGCACTTAGACGTGAAGCTCTTGAAGGTGTAAACATATGTATGGTCCTTCACCAACCGAGTTACACGTTGTTCAAGATGTTTGACGATTTTATACTGCTTGCTAAAGGAGGTCTAACAGTGTATCATGGACCTGTGAACAAAGTGGAAGAGTACTTCTCTAGCATGGGGGTCGTTGTCCCCGACCGTGTCAACCCTCCAGATTACTACATCGACATTTTAGAAGGAATATTAAAACCAAGTGCAAGTTCAGGAGTGAACCATAAACAACTACCAGTTAGATGGATGCTTCATAATGGATATTCTGTGCCTATGGATATGCTGCATACTATAGAAGGAATGTCAGCTCCAACCGGTGTTCCGACACAAGGAGCACCTAACCCTAATGCAAAGCTTACTGCCGCACCTTCTTTTGCCGGAGAACTTTGGCAGGACGTGAAGTGCAACGTTGAGATGAAGAGAGACAATCTTCAACTCAACTTCTTAGCTTCAAACGATTTGTCCAACAGGACTACACCAGGATCTTTCATACAATACAAATACTTTCTTGGAAGAGTTGGTAAGCAGCGGTTGCGAGAAGCTAGAACGCAAGCTGTAGATTTTCTGATTCTGCTGCTGGCTGGTGTTTGCTTAGGAACACTTGCCAAAGTGAGTGATGAATCGTTTGGAGCAACTGGTTATACATACACTGTAATTGCAGTATCACTTCTTTCCAAGATTGCTGCTCTGAGATCATTCTCATTGGATAAGTTGCATTACTGGAGAGAAAGCGCTTCTGGGATGAGTAGCCTCGCTTACTTTCTTTCAAAGGATACAGTTGACCATTTCAGTACAATTATCAAACCTTTGGTTTATCTTTCCATGTTCTATTTCTTCAACAATCCAAGATCATCTTTCACAGATAATTACATTGTTCTACTATGTTTGGTGTATTGTGTCACTGGCATAGCTTATGTGTTGGCAATCTTTCTTCAACCCGGTCCAGCCCAGCTATGGTCCGTGTTACTACCGGTAGTTTTGACTCTCCTAGCAACTTATGACAATGAAGAGGAAAGCAAATATGTGGAATTTCTATCTGATTTGTGCTATACCAAGTGGGCTCTTGAAGCATTTGTTATATCAAATGCTAAAAGATATTCTGGAGTTTGGTTAATAAGCCGATGTGGTGCACTCAACAAATACGGCTATGATCTCAAACATTGGTACCAATGTTTAGGACTCCTTGTTGTGACAGGAATAATCAGTCGCATGCTTGCATTTTTTTGTATGATGACATTCCAGAAGAAATAG 3226 0.4135 FNVGPQLVSCQKNAGGGGGGGAGFEIFAKELYNSLSNYTDVFKGAIKKELGYCIMDVDADWDGAFNFTKDLTFLTMCAQEMKGDITQRMCTAGEIEAYARSFAGGTGKAKGNLLKPNLNCNMSSWLNGCEPGWGCKANQKVDLNSKKKEVPARSVDCHPCCEGFFCPRGITCMIPCPLGSFCPRGELNKTSGICAPYRYQLPPGKDNHSCGGADIWADIASSSEVFCSAGSYCPSTIIKNSCSRGSYCRTGSTAQERCFRLASCEPKSANQNITAYGLLVFAGLCFLLIIIYNCSDQVLATRERRQAKSRERAAASVRETQAREKWKSAKDIAKKHATGLQSQLSRTFSRKKTSKMPDFKGVLPPMPGSSKAKKKDKNNLSKIINDIEQDPDSQEGFNVQIGDKNVKKQAPRGKQLHTQSQIFKYAYGQIEKEKALQEQNKNLTFSGVISMANDIDIRKRPTIEVAFKDLTLTLKGKNKHLLRCVTGKIYPGRVSAVMGPSGAGKTTFLSALTGKATGCHTTGQVLVNGQESPIRSFKRIIGFVPQDDIVHGNLTVEENLWFSARCRLSADLPKEEKVLVVERVIESLGLQAIRDSLVGTIEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVLHQPSYTLFKMFDDFILLAKGGLTVYHGPVNKVEEYFSSMGVVVPDRVNPPDYYIDILEGILKPSASSGVNHKQLPVRWMLHNGYSVPMDMLHTIEGMSAPTGVPTQGAPNPNAKLTAAPSFAGELWQDVKCNVEMKRDNLQLNFLASNDLSNRTTPGSFIQYKYFLGRVGKQRLREARTQAVDFLILLLAGVCLGTLAKVSDESFGATGYTYTVIAVSLLSKIAALRSFSLDKLHYWRESASGMSSLAYFLSKDTVDHFSTIIKPLVYLSMFYFFNNPRSSFTDNYIVLLCLVYCVTGIAYVLAIFLQPGPAQLWSVLLPVVLTLLATYDNEEESKYVEFLSDLCYTKWALEAFVISNAKRYSGVWLISRCGALNKYGYDLKHWYQCLGLLVVTGIISRMLAFFCMMTFQKK* 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3328 1074 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 466 705 IPR027417 -
Psa7g3328 1074 SMART AAA_5 491 692 IPR003593 -
Psa7g3328 1074 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 24 1070 - -
Psa7g3328 1074 CDD ABCG_EPDR 463 689 - -
Psa7g3328 1074 Pfam ABC transporter 485 634 IPR003439 GO:0005524
Psa7g3328 1074 ProSitePatterns ABC transporters family signature. 606 620 IPR017871 GO:0005524
Psa7g3328 1074 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 24 1070 - -
Psa7g3328 1074 Pfam ABC-2 type transporter 663 1074 IPR043926 GO:0140359
Psa7g3328 1074 Gene3D - 454 704 IPR027417 -
Psa7g3328 1074 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 465 706 IPR003439 GO:0005524
Psa7g3328 1074 MobiDBLite consensus disorder prediction 343 377 - -
Psa7g3328 1074 MobiDBLite consensus disorder prediction 308 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3328 Psa-Chr7 253975504 253980924 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3328 492 687 Calmodulin-binding Proteins AT2G36910 30.093 1.70e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3328 - - gmx:100794093 1845.48