Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3297 ATGAGATTGGAGAAATGCTGGTTCTGTTCTTCTACTGTATATCCTGGACACGGAATCCAGTTTGTTCGCAACGATGCAAAGATTTTTCGATTTTGTAGGTCTAAGTGCCACAAGAACTTTAAAATGAAGAGGAACCCTCGGAAAGTAAAATGGACCAAGGCATATAGGCGAGTGCACGGAAAGGACATGACACAGGATTCAACCTTTGAGTTTGAGAGGAAGCGTAACAGGCCTGAGAGATACGACAGGAATCTTGCTAACAGTGTCCTCAACGCCATTCCAAAGATTGATAAGATCCGAGTTGCCCGGGAAAAGACACACCATGCGAATAGGATGAAGGGCAAGAAGGAGAAGGAACGGATGGAGGGTGCTAGGGAGTTGGAACAGAGCATCCATATGCTTCCCATTCCTAAGGTCAAAGTGGATGAACCTCTTAAGATTAAAGTGGCTGTTTCCCAACAACAATCAGAGCAAAATCTTGCAATGGAAGAGTGA 495 0.4465 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNRPERYDRNLANSVLNAIPKIDKIRVAREKTHHANRMKGKKEKERMEGARELEQSIHMLPIPKVKVDEPLKIKVAVSQQQSEQNLAMEE* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3297 164 Gene3D Ribosomal protein L24e 1 68 IPR038630 -
Psa7g3297 164 CDD Ribosomal_L24e_L24 1 54 IPR000988 -
Psa7g3297 164 PANTHER 60S RIBOSOMAL PROTEIN L24 1 164 IPR000988 -
Psa7g3297 164 SMART 4TRASH 6 44 IPR011017 -
Psa7g3297 164 Pfam Ribosomal protein L24e 1 65 IPR000988 -
Psa7g3297 164 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 56 - -
Psa7g3297 164 ProSitePatterns Ribosomal protein L24e signature. 8 25 IPR023442 -
Psa7g3297 164 PANTHER BNAA04G10330D PROTEIN 1 164 - -
Psa7g3297 164 MobiDBLite consensus disorder prediction 103 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3297 Psa-Chr7 249415073 249417659 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3297 1 164 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 69.512 3.04e-81 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3297 K02896 - gmx:100793564 271.937