Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3295 ATGATGGTCAGTGATCCTACAACTGATGCCATTGTTTCATGGAGTGCTACCAATAGAAGTTTCGTTGTTTGGGATCAACCTGAGTTTTCGAAGGAATTGTTGCCTAGATTCTTTAAACATAACAACTTCTCGAGTTTTGTTAGACAGCTTAACACCTATGGTTTTAGTAAGGTTGGTCAAGACCAATGGGAATTCTCAAATGAAGACTTTGTAAGAGATCAACCAAATCTCATGAAGAATATCCACAGGCGCAAACCAGTTTTTAGCCATTCTGCGTCTAATGCTCATAGGCAACGCGCTGCGACTTCTGGTGTTGTTGCTGTTGCTCCATTAACAGAATCAGAACGACGAAATTTCAAAGCTCTGATAGAAAACCTTAGACATGAAAAAGAAGAGCTACTTATGGAACGTCAGAGGCAACAAGAGGAGGGGAATCAAAACAAGATGCAGTTACGTTCCTCGAAGGATCGCTTGCAGCAGTTGGAACTAAATCAACAAACTTTGCACTCTTCCCTTGGTCAAGTGCTGCAGAAATATGCGGAAGAGGCAAGTCTCCTGCCATCTACAGTAAATACGGGGACAAAACGAAGTTATCTGGGAAATTGTCCCTATAAAAATTTAGCAAGCATTAAACTTCCGAAGGAAACTTCAGAAGAGTTATCTAAAGCGAATGTTGAGAGTGCGTCCGCTCTCAGTATAAACATGGAGCGATTGGATCTGCTCGAGTCATCATTGGCGTTTTGGGAGAGTCTTACAAAAGAAGTTACAGACACATCTTTTGAAACTGGTGCAAAGTTGAACTTTGATGATTTTATGAATCCTCCACATGGTCCCGGAATATCTCGTGCGCAACTAGATTTTGAAGTTCCGCCCGAGTCATCAAGAAACAAAACTAACTCTCTGCCAGATTCAGCCGTTGTTCCTAATCCTGATCCAGTAGAACTCGACTTGGATGAAATCTTTATTTATGATCCTGTTGTACCAGAGCCAAATGCTATCGCGGTTCCGGATCTAGTTGCACCTGTGCCGATTGTTACCGTTGTTCCTGACTCCACTACACTGAAAGAGCAACTTGTCGGAACAATCTCAGGTGCCACTGAATTTAATACACCATTTTGGCAAAAATGCTTGGTGGAAGATCCTTATGAGTTTGAATCAGAAAATCCCCGTGAAATTAGAAAATACTGCTGGAGCATCAAGGATCGAAAAAACCCTTAG 1218 0.4187 MMVSDPTTDAIVSWSATNRSFVVWDQPEFSKELLPRFFKHNNFSSFVRQLNTYGFSKVGQDQWEFSNEDFVRDQPNLMKNIHRRKPVFSHSASNAHRQRAATSGVVAVAPLTESERRNFKALIENLRHEKEELLMERQRQQEEGNQNKMQLRSSKDRLQQLELNQQTLHSSLGQVLQKYAEEASLLPSTVNTGTKRSYLGNCPYKNLASIKLPKETSEELSKANVESASALSINMERLDLLESSLAFWESLTKEVTDTSFETGAKLNFDDFMNPPHGPGISRAQLDFEVPPESSRNKTNSLPDSAVVPNPDPVELDLDEIFIYDPVVPEPNAIAVPDLVAPVPIVTVVPDSTTLKEQLVGTISGATEFNTPFWQKCLVEDPYEFESENPREIRKYCWSIKDRKNP* 406
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3295 405 Pfam HSF-type DNA-binding 2 84 IPR000232 GO:0003700|GO:0006355|GO:0043565
Psa7g3295 405 Gene3D - 1 85 IPR036388 -
Psa7g3295 405 PRINTS Heat shock factor (HSF) domain signature 33 45 IPR000232 GO:0003700|GO:0006355|GO:0043565
Psa7g3295 405 PRINTS Heat shock factor (HSF) domain signature 46 58 IPR000232 GO:0003700|GO:0006355|GO:0043565
Psa7g3295 405 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-4C 2 388 - -
Psa7g3295 405 Coils Coil 116 143 - -
Psa7g3295 405 SUPERFAMILY "Winged helix" DNA-binding domain 2 84 IPR036390 -
Psa7g3295 405 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 2 388 IPR027725 -
Psa7g3295 405 SMART hsfneu3 2 84 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Psa7g3295 Psa-Chr7 249306104 249307687 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3295 17 305 HSF AT4G18880 40.199 2.07e-56 189
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Psa7g3295 HSF_DNA-bind 4.2e-28 CL0123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3295 K09419 - gmx:100798004 299.671