Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3279 ATGACAACTTTCGAAGACTCAGAGAAGGAGAGCGAATACGGTTACATTCCCAAGGCATCTGAACTCGTCGTGGTTGCAGATGACATGAATGAGGCTGCTATGTACGAACTGGTGCGTAGTGGTCGAGAAAATCTTAATAGTGAAATCATCCGTTTGGAAGGAGATTCTGCCGCTATCCAAGTTTATGAGGAAACTGTTGGGTTGATGATTAATGATCCGGTGGGGCCTTTAAAAACTATTGCAAGAATACCTGCTGATGTCTATACTCCCTGTGGTGTCTCTGTTTATGCTACTGTTTTCAAGAACAGTTTGATGGAGCACCGTGTGGCACTTCCTCCTGATGCGATGGGAAAGGCTACCTATGTAGCACCGGCAAGCCAATATTCCTTGAAGGACACTATGTTGGAGTTGGAGTTTCAAGGTGTTAAAAAGAAAGTCCACCATGCTTCAGAGTTAGCCTGTACGTACACCAAGTACTTGGTAGGACATACGCTACATCAGGAGCTTTTTGTTGTACAGTCATTAGTCAAGCTCTTCCTAATGCTCTGTCAGGAACTCAGCCGACAGATTGAAGATATTGGAGTTTGTCCGTGTCCTCCGCAGAAGGTCCCTTCCAGTGAAGCAGCGGCGGATAAATCCGCAACGTCATTGACAACATGTAAGGTGGAAATAGGGAGGCCTACAACCCAAGATCAAGGTGTAAACTCTCTGAATGTTGGCGCTGATGTAGTAGAAGATGTTTCTTTGAGAACTTCAAATAGTGAAAGAGGTAATAAACACAATCTTGCATCCAAACCTGCCGACCTTTTGTCCCCGCATGCTTCTATTACAACTGCAGTGGATGAGTCTATCACAAATGAAAAAGAGAATGAAGAAAAAGGAAGATTGTTGCCTTTATCTGAAGATGTTTCCAGTACACATGTGGTGCGAACGAGAGAAGATCAGGAAGCTGATGAGTTGGATATGGCGAAATCTTGTCGAAAAAACTGA 990 0.4404 MTTFEDSEKESEYGYIPKASELVVVADDMNEAAMYELVRSGRENLNSEIIRLEGDSAAIQVYEETVGLMINDPVGPLKTIARIPADVYTPCGVSVYATVFKNSLMEHRVALPPDAMGKATYVAPASQYSLKDTMLELEFQGVKKKVHHASELACTYTKYLVGHTLHQELFVVQSLVKLFLMLCQELSRQIEDIGVCPCPPQKVPSSEAAADKSATSLTTCKVEIGRPTTQDQGVNSLNVGADVVEDVSLRTSNSERGNKHNLASKPADLLSPHASITTAVDESITNEKENEEKGRLLPLSEDVSSTHVVRTREDQEADELDMAKSCRKN* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3279 329 MobiDBLite consensus disorder prediction 278 329 - -
Psa7g3279 329 MobiDBLite consensus disorder prediction 284 298 - -
Psa7g3279 329 Pfam ATP synthase alpha/beta family, beta-barrel domain 23 75 IPR004100 GO:0046034|GO:1902600
Psa7g3279 329 Pfam ATPsynthase alpha/beta subunit N-term extension 94 145 IPR031686 -
Psa7g3279 329 Gene3D - 91 146 - -
Psa7g3279 329 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 9 76 IPR036121 GO:0046034|GO:1902600
Psa7g3279 329 MobiDBLite consensus disorder prediction 306 329 - -
Psa7g3279 329 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 92 146 IPR022878 GO:0046034|GO:0046961
Psa7g3279 329 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 1 74 IPR022878 GO:0046034|GO:0046961
Psa7g3279 329 Gene3D - 5 80 IPR023366 -
Psa7g3279 329 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 92 146 - -
Psa7g3279 329 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3279 Psa-Chr7 248143725 248145620 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3279 1 144 Primary Pumps ATPases(2) AT1G78900 56.410 4.96e-59 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3279 K02145 - sly:543861 198.749