Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3275 ATGGTAGATTTCCCTCCACCTGGTTTTCGTTTCTTCCCAACTGAAGAAGAGCTTGTTAGTTTTTACCTAAAGAACAAGCTACAAGGAGAAAAAAGAAATGCTTTTGATAGGGTTATTCCTGTCATTGACATCAATGGTGTAGAACCATGGGACCTCCCAACTCTTGCGGGGGAGCTTTGCCGTGAAGATAAAGAGCAATGGTTTTTCTTTTCGCCGGGGCAAGAGAGAGAAGCTAGAGGAGGGAGACCTAATAGAACTACTGGTTGTGGTTATTGGAAGGCCACAGGCTCTCCTGGTTATGTTTATTCTTGTGATAATAAAGTTATTGGGGTGAAGAAAACAATGGTGTTCTATAAAGGAAAAGCTCCTAGTGGAAGGAAAACTAAATGGAAGATGAATGAATACAGAGCCATTCAAGTGTGTAACCAATCCAACACTGCCACACCTCAGTTAAGGAGAGAATTCAGTGTGTGTCGAGTATATGTGATATCGGGAAGCTTTCGAGCATTTGATAGACGTCCATTAGAGAACGAAAGAGAGGATGGATTTCGAGTTAATAAGATTGATCAAAATCCATTTATTGCTTCGTGTTCTAATCAAAATGCAAGAATGGATCATGCATCAACTTCATTTGAAATTTCTCAATTAGAGGGACTCCAAAGTGTTTATGCTCCAGAGGTTGCAGGAGGTTCAAATAGCAGTAATTGGAATGTAGATAACAATGGTGATATTGGTGATGAGATTCAAATCCAAGAACCACTGTGGGAATGGGAATGGGAATGGGAACATTTTAATTGA 798 0.401 MVDFPPPGFRFFPTEEELVSFYLKNKLQGEKRNAFDRVIPVIDINGVEPWDLPTLAGELCREDKEQWFFFSPGQEREARGGRPNRTTGCGYWKATGSPGYVYSCDNKVIGVKKTMVFYKGKAPSGRKTKWKMNEYRAIQVCNQSNTATPQLRREFSVCRVYVISGSFRAFDRRPLENEREDGFRVNKIDQNPFIASCSNQNARMDHASTSFEISQLEGLQSVYAPEVAGGSNSSNWNVDNNGDIGDEIQIQEPLWEWEWEWEHFN* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3275 265 Pfam No apical meristem (NAM) protein 6 136 IPR003441 GO:0003677|GO:0006355
Psa7g3275 265 SUPERFAMILY NAC domain 5 161 IPR036093 GO:0003677|GO:0006355
Psa7g3275 265 Gene3D NAC domain 14 166 IPR036093 GO:0003677|GO:0006355
Psa7g3275 265 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 5 258 - -
Psa7g3275 265 ProSiteProfiles NAC domain profile. 5 163 IPR003441 GO:0003677|GO:0006355
Psa7g3275 265 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3275 Psa-Chr7 247979902 247981318 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3275 1 258 NAC Transcription Factor Family AT5G22380 52.107 1.71e-84 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Psa7g3275 NAM 3.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3275 - - cam:101497878 380.948