Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3257 ATGCTTCTTTCATGTCAAAACCACACTCTTTACCTTCCTTCTTCTTCCATCCATTCCGTCAAGAATTCGAAATCCAACATTATCATCAATTGCCAAACCCCAAACGAACAAAACCAACCCATTCCCAGAAGACACAATTCAAAATCCACTTCATTTCTCATCCACCACCTTTCACACAAAAACAGCGACAATCATCACTCTTCACCCACTGAGCTACAAGACCCAATACCGCATGAAGAAAAAGTGAAGCTTTTAGAACTTTCCTTAGTGAGGAAAAGAACCCCACAATTTCCTGGTTCAATTTATGCTCAATCCCCTAGTGACTCTGATGTGGGTTCTTCTCTTCCTCCTCTTCGTACGCTTTTTAGATCGCGTGATGAAGAAGAAGAGGTCTTAATCATGAAAGCTCTTGAAATTCGTAGGAAGGTTACGGAAGAGGTTTTCAAAGAACAAATGAGAAAGGGTAAATTTGGAATTACTTATACAGACAATTTGGTTTCTAAGTTGGGTGGTTTTGTTGATTATGTTATGATTGAAGCTGCTAACTTGAAAAGATTGCCTCAATATTCTCACTCTACTTTCAATTTACGCGCCAAAACTGTTATTGAAGATTCCCAAGTTGTACAACTTATTAGATGGTTGAAACATAATTCTCTATCGTATCCTCAGATAGCTAAGCTCGTTTTGATGTCAAGGGGGAAACTTGAGTCCATTAGGAACCGTATTGAGTGGTTGAAGTCGGTGCATGTTAAGGGAGACTTTATTGGGGATGCAATGTTGAAGGGTGGAGATAATGTTTTGCTGCGGAGTGATCGGGAGCTTGATGAGATTGTTGAGTGTTTAGAATCCAATGGTGTAAGGAGGGAATGGATGGGTTATGTTGTGAGTCGGTGTCCGAAGTTGTTATCTTACAGCTTGGAAGAAGTGAAGATTCGTGTGCAGTTCTATCTGGATATGGGTTTAGATGAGAAGGATTTTGGCACAATGGTTTTCGATTTTCCTAAAGCACTTGGTTACTATACAATTGAAGAAATGAACCGAAAGGTTGATTACTTGAAAGAATTCGGGCTTGATAATAAGGATGTCGGTAAGTTGCTTGCATTTAGGCCACAGTTGATGGCGTGCAGCATTGAAGAACGATGGAAACCTCTTGTTAAGTATCTGTACTATTATGGGATTACTCGAGATGGGATGAAGAGAATGCTTATCATTAAACCAATGGTCTTTTGTTTTGACTTGGAGATAACTATTGTGCCAAAGGTAAAGTTTTTTCAGGACCTAGGGGTTCGAAACGACGGGATTGCTAACATGCTTGTAAAATTTCCTACTCTACTCACTTACAGCCTTTACAAAAAGATTAGGCCTGTGGTCATATTCTTGATGACCAAGGCTGGAGTCACTGAAGAATCTATTGGAAAGGTTGTAGCTCTTGGACCTGAGCTCTTGGGATGCAGCATAGTACATAAGCTCGAAGTAAATGTAAAATATTATTTGTCTCTTGGCATTCGTCTTCGGCAACTGGGTGAAATGGTCGCTGATTTCCAAATGCTGCTGAGATACAATATAGATGTTCTTCGTCCTAAGTATACGTATTTGCGGAAAACCATGGTCCGAACTTTGCAAGATCTAATTGAATTTCCGAGGTTTTTCAGCTATTCTCTCGAGGGTCGAATAATCCCAAGACACAAGGTTCTGGTGGAGAATCAGATAAATGTCAAACTAAAATGCATGTTAGCTTGTACTGATGAAGAGTTTAACAAAATGGTCAACAATATGATTCGAAAACGCCACAAGTTCCAATCTACTGTCATGAAGGGGGATACTCCGCATTCCCAATCTCTTGTTACTGGGGATATTACTGCACCCCAGACTTAA 1875 0.4 MLLSCQNHTLYLPSSSIHSVKNSKSNIIINCQTPNEQNQPIPRRHNSKSTSFLIHHLSHKNSDNHHSSPTELQDPIPHEEKVKLLELSLVRKRTPQFPGSIYAQSPSDSDVGSSLPPLRTLFRSRDEEEEVLIMKALEIRRKVTEEVFKEQMRKGKFGITYTDNLVSKLGGFVDYVMIEAANLKRLPQYSHSTFNLRAKTVIEDSQVVQLIRWLKHNSLSYPQIAKLVLMSRGKLESIRNRIEWLKSVHVKGDFIGDAMLKGGDNVLLRSDRELDEIVECLESNGVRREWMGYVVSRCPKLLSYSLEEVKIRVQFYLDMGLDEKDFGTMVFDFPKALGYYTIEEMNRKVDYLKEFGLDNKDVGKLLAFRPQLMACSIEERWKPLVKYLYYYGITRDGMKRMLIIKPMVFCFDLEITIVPKVKFFQDLGVRNDGIANMLVKFPTLLTYSLYKKIRPVVIFLMTKAGVTEESIGKVVALGPELLGCSIVHKLEVNVKYYLSLGIRLRQLGEMVADFQMLLRYNIDVLRPKYTYLRKTMVRTLQDLIEFPRFFSYSLEGRIIPRHKVLVENQINVKLKCMLACTDEEFNKMVNNMIRKRHKFQSTVMKGDTPHSQSLVTGDITAPQT* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3257 624 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF2, CHLOROPLASTIC 62 609 - -
Psa7g3257 624 Pfam mTERF 279 585 IPR003690 GO:0003690|GO:0006355
Psa7g3257 624 Pfam mTERF 220 353 IPR003690 GO:0003690|GO:0006355
Psa7g3257 624 PANTHER CGI-12 PROTEIN-RELATED 62 609 IPR003690 GO:0003690|GO:0006355
Psa7g3257 624 Gene3D Transcription termination factor 3, mitochondrial 368 600 IPR038538 -
Psa7g3257 624 SMART mt_12 327 358 IPR003690 GO:0003690|GO:0006355
Psa7g3257 624 SMART mt_12 540 571 IPR003690 GO:0003690|GO:0006355
Psa7g3257 624 SMART mt_12 435 467 IPR003690 GO:0003690|GO:0006355
Psa7g3257 624 SMART mt_12 292 322 IPR003690 GO:0003690|GO:0006355
Psa7g3257 624 SMART mt_12 472 503 IPR003690 GO:0003690|GO:0006355
Psa7g3257 624 SMART mt_12 363 394 IPR003690 GO:0003690|GO:0006355
Psa7g3257 624 SMART mt_12 508 538 IPR003690 GO:0003690|GO:0006355
Psa7g3257 624 SMART mt_12 399 430 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3257 Psa-Chr7 245708770 245712788 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Psa7g3257 mTERF 2.1e-66 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3257 K15032 - mnt:21401514 833.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g3257 7 245708770 245712788 Psa7g3257 7 245708770 245712788 ECH